Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRTM2O43300 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRTM2O43300 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRTM2O43300 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
LRRTM2O43300 AL359091.1-201ENST00000449048 1734 ntBASIC5.43□□□□□ -1.54
LRRTM2O43300 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRTM2O43300 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LRRTM2O43300 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LRRTM2O43300 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC239868.2-201ENST00000564237 4527 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
LRRTM2O43300 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 RNA5SP132-201ENST00000364725 118 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LRRTM2O43300 OR7E101P-201ENST00000400428 513 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AL096829.1-201ENST00000413677 457 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC009506.2-201ENST00000420635 840 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AC093155.2-201ENST00000420734 937 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC002504.1-201ENST00000438281 691 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRTM2O43300 VN1R96P-201ENST00000446052 858 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRTM2O43300 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRTM2O43300 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRTM2O43300 AC079395.2-201ENST00000610982 737 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AL354950.1-201ENST00000614150 568 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AC087821.1-201ENST00000623639 567 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRTM2O43300 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 LINC02019-201ENST00000608605 2060 ntBASIC5.42□□□□□ -1.54
LRRTM2O43300 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRTM2O43300 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LRRTM2O43300 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRTM2O43300 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LRRTM2O43300 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRTM2O43300 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 AC005224.3-201ENST00000584683 2140 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRTM2O43300 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 GNL2P1-201ENST00000451274 2190 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRTM2O43300 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LRRTM2O43300 RNA5SP453-201ENST00000362503 119 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 RN7SKP162-201ENST00000363605 345 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LRRTM2O43300 PEX12P1-201ENST00000400284 1048 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRTM2O43300 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AL512593.1-201ENST00000444758 779 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 GAPDHP23-201ENST00000444823 993 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 AL162739.1-201ENST00000450606 307 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 RN7SL799P-201ENST00000475891 298 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 SIAH1P1-201ENST00000479411 923 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 TRBV5-2-201ENST00000489095 273 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 OR5M14P-201ENST00000506803 618 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 DUTP7-201ENST00000507982 486 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRRTM2O43300 snoU109.5-201ENST00000516231 132 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 TPM3P3-201ENST00000521343 354 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRTM2O43300 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.41□□□□□ -1.54
LRRTM2O43300 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 AP002884.5-201ENST00000595053 1132 ntBASIC5.41□□□□□ -1.54
LRRTM2O43300 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LRRTM2O43300 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.41□□□□□ -1.54
LRRTM2O43300 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms