Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM38O00635 AC007956.1-201ENST00000555623 542 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM38O00635 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM38O00635 AC005776.1-201ENST00000603164 290 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 AC022106.1-201ENST00000612834 766 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM38O00635 MIR6886-201ENST00000619864 61 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM38O00635 AP001153.1-201ENST00000641024 338 ntBASIC6.12□□□□□ -1.43
TRIM38O00635 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM38O00635 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
TRIM38O00635 AC008627.1-201ENST00000517511 1704 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 AL627171.1-201ENST00000618845 1308 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 AC007382.1-201ENST00000624376 2618 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM38O00635 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
TRIM38O00635 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 SNORA21-201ENST00000362423 132 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 RNU1-134P-201ENST00000362935 165 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 SNORA17A-201ENST00000391185 133 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 AL034403.1-201ENST00000399414 885 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 AC092651.1-201ENST00000426110 312 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 BX119321.1-201ENST00000428912 797 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM38O00635 RPS27AP3-201ENST00000453803 454 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM38O00635 AC093719.1-201ENST00000480427 441 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 AL035690.1-201ENST00000490892 383 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM38O00635 CR383658.1-201ENST00000514609 734 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM38O00635 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM38O00635 OSBPL9P3-201ENST00000534523 595 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM38O00635 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.11□□□□□ -1.43
TRIM38O00635 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM38O00635 AC015911.5-201ENST00000587076 451 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.11□□□□□ -1.43
TRIM38O00635 AP003117.1-201ENST00000602771 554 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 AC019131.2-201ENST00000609071 870 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 MIR1264-201ENST00000616374 69 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 SNORA17.5-201ENST00000630429 132 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 OR6C71P-202ENST00000641886 1107 ntBASIC6.11□□□□□ -1.43
TRIM38O00635 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM38O00635 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM38O00635 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM38O00635 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM38O00635 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM38O00635 RNU6-650P-201ENST00000365658 111 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.1□□□□□ -1.43
TRIM38O00635 AL391422.1-201ENST00000402155 436 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 RN7SKP229-201ENST00000410465 302 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC234781.4-201ENST00000419384 244 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 ARL2BPP3-201ENST00000421226 480 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM38O00635 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM38O00635 AC016027.5-201ENST00000427227 210 ntBASIC6.1□□□□□ -1.43
TRIM38O00635 MTND6P12-201ENST00000428247 522 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms