Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC008745.1-201ENST00000604064 271 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC135068.5-201ENST00000624197 983 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC073869.10-201ENST00000642016 354 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 CCDC162P-202ENST00000368966 6751 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC068733.2-201ENST00000605434 1418 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC114947.2-201ENST00000565748 2125 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 RNA5SP87-201ENST00000384155 118 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC092324.1-201ENST00000468671 324 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 RN7SL385P-201ENST00000468873 276 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 RN7SL459P-201ENST00000481078 302 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 RNA5SP373-201ENST00000517271 95 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC095055.1-201ENST00000603472 1113 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AC006600.2-201ENST00000624834 2506 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 EPS15P1-202ENST00000459691 2071 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 MFSD8-216ENST00000641147 4009 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AC016745.2-201ENST00000608834 3443 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 MIR192-201ENST00000384915 110 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 RPS3AP53-201ENST00000454716 778 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AC009704.2-201ENST00000618739 483 ntBASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.12□□□□□ -1.11
SHANK2Q9UPX8 AL078621.3-201ENST00000623707 2042 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 RNU4-4P-201ENST00000364588 130 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 PCNPP1-201ENST00000552501 511 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AP005403.1-201ENST00000579720 229 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AC060766.1-201ENST00000590824 627 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 AP003789.1-201ENST00000617737 605 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 MTCO1P1-201ENST00000624263 1081 ntBASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHANK2Q9UPX8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC8.1□□□□□ -1.11
SHANK2Q9UPX8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms