Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 HMGN1P13-201ENST00000505795 138 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 TMEM97P2-201ENST00000517841 403 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 RGS5-220ENST00000528689 566 ntTSL 5 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 OR4N3P-201ENST00000559395 818 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC244034.2-201ENST00000562504 509 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 U73023.1-201ENST00000603134 700 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AL583832.1-201ENST00000603227 784 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC023513.1-201ENST00000604396 691 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC024060.1-201ENST00000607052 494 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC012557.1-201ENST00000607115 611 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC004223.4-201ENST00000612426 332 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC010998.3-201ENST00000613871 631 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AC135068.4-201ENST00000622949 925 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 CASC19-232ENST00000641480 1244 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 AP001350.1-201ENST00000601906 1524 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 NCOA4P3-201ENST00000513203 1877 ntBASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PDZRN3Q9UPQ7 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL034417.4-202ENST00000642135 2236 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC123769.2-201ENST00000624332 5984 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 TMSB4XP4-201ENST00000323496 618 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RNU6-254P-201ENST00000363377 107 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SNORA75-201ENST00000384158 137 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 Y_RNA.460-201ENST00000384255 102 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RNU6-876P-201ENST00000391295 104 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 CYP2AC1P-201ENST00000407830 1173 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL773545.3-201ENST00000414297 706 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RPL7P53-201ENST00000421245 739 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 PTPN2P1-201ENST00000423212 1072 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 IGKV1OR10-1-201ENST00000442306 329 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RPL5P10-201ENST00000445207 894 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SUMO1P2-201ENST00000452524 304 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL390728.3-201ENST00000452704 270 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL157777.1-201ENST00000468100 304 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RN7SL160P-201ENST00000468558 284 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC092989.1-201ENST00000481235 277 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 NDUFB4P12-201ENST00000513465 390 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC090695.1-201ENST00000561269 1222 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RN7SL667P-201ENST00000582817 298 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC010928.3-201ENST00000587712 541 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RPL7AP69-201ENST00000595306 806 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC011500.1-201ENST00000601963 469 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL020997.3-201ENST00000602843 359 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC010680.4-201ENST00000605334 543 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL355333.1-201ENST00000605632 279 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC090425.1-201ENST00000610007 140 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC090574.1-201ENST00000623186 233 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 AC008626.2-201ENST00000624425 248 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SPATA31C1-201ENST00000420021 3895 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 CASC19-206ENST00000641028 1430 ntBASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PDZRN3Q9UPQ7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms