Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC022325.1-201ENST00000502748 2199 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 EI24P3-201ENST00000399046 1062 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AL451046.1-201ENST00000406097 534 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RPS7P8-201ENST00000418311 581 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 MARK2P12-201ENST00000420129 585 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC115283.1-201ENST00000427353 400 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 USP12PY-201ENST00000427677 1064 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RPS27AP3-201ENST00000453803 454 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RPL23AP73-201ENST00000492507 471 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC093534.1-201ENST00000504977 132 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RNU6-1102P-201ENST00000516149 96 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RN7SKP5-201ENST00000517045 272 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 Y_RNA.717-201ENST00000517106 92 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC092865.1-201ENST00000544395 1023 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC090115.2-201ENST00000548060 883 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 CYCSP38-201ENST00000559840 322 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 ZNF92P2-201ENST00000600543 1059 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC068768.2-201ENST00000602352 343 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AL021368.3-201ENST00000607119 578 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC006946.3-201ENST00000609791 756 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 RFPL4AP6-201ENST00000616792 846 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AL137067.2-201ENST00000621202 131 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC068787.1-201ENST00000623908 691 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 LYARP1-201ENST00000436977 1501 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 AP001541.1-201ENST00000623322 1904 ntBASIC6.19□□□□□ -1.42
DKK3Q9UBP4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
DKK3Q9UBP4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AL354854.1-201ENST00000455940 1363 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 SNORD8-201ENST00000363915 110 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 Z68694.1-201ENST00000413929 841 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RCC2P2-201ENST00000422174 918 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 RPL12P18-201ENST00000437175 325 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC110602.1-201ENST00000437414 318 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 ELOCP3-201ENST00000439303 348 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC004854.1-201ENST00000440356 349 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC103563.5-201ENST00000455643 364 ntBASIC6.18□□□□□ -1.42
DKK3Q9UBP4 AC023194.2-201ENST00000465398 406 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms