Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 FAM72A-208ENST00000607379 1139 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC000068.2-201ENST00000608816 460 ntBASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CISHQ9NSE2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.83□□□□□ -1.48
CISHQ9NSE2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 RNA5SP435-201ENST00000364044 108 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 PPIAP9-201ENST00000403866 498 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC105399.1-202ENST00000447303 205 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 RNA5SP362-201ENST00000516048 118 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 AP003080.1-202ENST00000526526 915 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 OR11H3P-201ENST00000554547 982 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 MIR8080-201ENST00000622224 89 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC135068.5-201ENST00000624197 983 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 AC021766.1-201ENST00000624404 741 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 AL353796.1-201ENST00000561542 3241 ntBASIC5.82□□□□□ -1.48
CISHQ9NSE2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CISHQ9NSE2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.82□□□□□ -1.48
CISHQ9NSE2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC100757.1-201ENST00000616872 1835 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 RNU11-201ENST00000387069 134 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 SRSF1P1-201ENST00000424058 520 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 RPL12P17-201ENST00000432393 498 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AL672138.1-201ENST00000450604 1015 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 RN7SL547P-201ENST00000490793 290 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AL136038.1-201ENST00000497246 351 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 HMGB1P44-201ENST00000508597 572 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 OR8G3P-201ENST00000533406 921 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC011445.2-201ENST00000599274 173 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AL360012.1-201ENST00000602813 131 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 SUGT1P3-202ENST00000604259 383 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AC007786.3-201ENST00000615154 596 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 uc_338.7-201ENST00000621834 124 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 MAPK10-261ENST00000641050 3109 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.81□□□□□ -1.48
CISHQ9NSE2 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 ABCC13-202ENST00000463099 3842 ntBASIC5.81□□□□□ -1.48
CISHQ9NSE2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CISHQ9NSE2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CISHQ9NSE2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms