Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.88□□□□□ -1.31
PTPN18Q99952 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN18Q99952 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN18Q99952 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.88□□□□□ -1.31
PTPN18Q99952 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN18Q99952 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN18Q99952 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN18Q99952 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PTPN18Q99952 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PTPN18Q99952 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN18Q99952 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 YES1P1-201ENST00000418510 1628 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN18Q99952 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 HDAC1P2-201ENST00000453661 1398 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC092725.2-201ENST00000567658 1389 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 AL353625.1-202ENST00000366273 571 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 HIGD1AP15-201ENST00000416198 280 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 NME1P1-201ENST00000420914 382 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 NMD3P2-201ENST00000421815 761 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 NPM1P26-201ENST00000426339 738 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 VN1R21P-201ENST00000426703 765 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AL139148.1-201ENST00000427122 680 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN18Q99952 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN18Q99952 RPL7P34-201ENST00000433316 712 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 MTCO3P5-201ENST00000433620 714 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 SETD6P1-201ENST00000444575 317 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN18Q99952 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.87□□□□□ -1.31
PTPN18Q99952 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN18Q99952 MTCO2P9-201ENST00000503214 694 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN18Q99952 HMGB1P47-201ENST00000511281 589 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 SOX5P1-201ENST00000524155 1127 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN18Q99952 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
PTPN18Q99952 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 IGBP1P1-201ENST00000554337 1009 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC107993.1-201ENST00000591343 684 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 AP001160.4-201ENST00000596971 382 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AL022161.1-201ENST00000604390 213 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AC080013.3-201ENST00000606839 578 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC068880.4-201ENST00000623082 495 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AP003485.2-201ENST00000623636 610 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 SRRM1P3-201ENST00000426911 2678 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 AC025809.2-201ENST00000625085 1802 ntBASIC6.87□□□□□ -1.31
PTPN18Q99952 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN18Q99952 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.87□□□□□ -1.31
PTPN18Q99952 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.87□□□□□ -1.31
PTPN18Q99952 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
PTPN18Q99952 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
PTPN18Q99952 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PTPN18Q99952 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.86□□□□□ -1.31
PTPN18Q99952 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.86□□□□□ -1.31
PTPN18Q99952 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
PTPN18Q99952 CUL4AP1-201ENST00000514750 1863 ntBASIC6.86□□□□□ -1.31
PTPN18Q99952 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PTPN18Q99952 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.86□□□□□ -1.31
PTPN18Q99952 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 OR10R3P-201ENST00000361688 942 ntBASIC6.86□□□□□ -1.31
PTPN18Q99952 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.86□□□□□ -1.31
PTPN18Q99952 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 MTCO3P30-201ENST00000426425 670 ntBASIC6.86□□□□□ -1.31
PTPN18Q99952 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.86□□□□□ -1.31
PTPN18Q99952 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PTPN18Q99952 AL512637.2-201ENST00000431287 1256 ntBASIC6.86□□□□□ -1.31
PTPN18Q99952 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms