Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.67□□□□□ -1.5
PKP4Q99569 AC015799.1-201ENST00000622996 3122 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PKP4Q99569 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 SMG1P7-201ENST00000565246 2704 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PKP4Q99569 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 MFSD8-239ENST00000641590 2479 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 RNU1-150P-201ENST00000362491 162 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 OR13C3-201ENST00000374781 1108 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 RNU2-72P-201ENST00000411175 163 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 AP000949.1-201ENST00000438328 629 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 HLA-DPA3-207ENST00000454398 229 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 ACA64.1-201ENST00000459171 127 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 snoU13.29-201ENST00000459370 104 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 SEPT7P6-201ENST00000469999 1143 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.66□□□□□ -1.5
PKP4Q99569 PFN1P8-201ENST00000497012 543 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AC006499.4-201ENST00000510947 694 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AC060775.1-201ENST00000518241 520 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.66□□□□□ -1.5
PKP4Q99569 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.66□□□□□ -1.5
PKP4Q99569 AP000919.1-201ENST00000582850 985 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AP001267.4-201ENST00000602598 545 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 BNIP3P35-201ENST00000604530 490 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 FAM27E4-201ENST00000605259 342 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AC016542.1-201ENST00000608259 493 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AL451049.1-201ENST00000608672 497 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AL355816.2-201ENST00000610049 647 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 AP005131.7-201ENST00000610087 611 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.66□□□□□ -1.5
PKP4Q99569 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PKP4Q99569 AL163152.1-201ENST00000642001 374 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.66□□□□□ -1.5
PKP4Q99569 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PKP4Q99569 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.66□□□□□ -1.5
PKP4Q99569 AC097461.1-201ENST00000568928 2821 ntBASIC5.66□□□□□ -1.5
PKP4Q99569 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.65□□□□□ -1.5
PKP4Q99569 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.65□□□□□ -1.5
PKP4Q99569 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PKP4Q99569 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PKP4Q99569 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PKP4Q99569 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 RAB5CP1-201ENST00000395972 580 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.65□□□□□ -1.5
PKP4Q99569 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.65□□□□□ -1.5
PKP4Q99569 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 AL035660.1-201ENST00000422041 222 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.65□□□□□ -1.5
PKP4Q99569 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.65□□□□□ -1.5
PKP4Q99569 CRIP1P1-201ENST00000427567 185 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 EIF5AP4-201ENST00000441206 465 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.65□□□□□ -1.5
PKP4Q99569 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 HMGN1P2-201ENST00000445197 310 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.65□□□□□ -1.5
PKP4Q99569 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.65□□□□□ -1.5
PKP4Q99569 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PKP4Q99569 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.65□□□□□ -1.5
PKP4Q99569 AC112206.4-201ENST00000515142 405 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AC026688.1-201ENST00000520639 1168 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AP000648.1-201ENST00000529682 397 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.65□□□□□ -1.5
PKP4Q99569 HNRNPCP1-201ENST00000556181 766 ntBASIC5.65□□□□□ -1.5
PKP4Q99569 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 348.4 ms