Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 AL512310.9-201ENST00000553311 948 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX18Q96RF0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC016839.1-201ENST00000578162 867 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 RPL29P33-201ENST00000587474 316 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX18Q96RF0 AL606834.3-201ENST00000602615 496 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 RPP40P2-201ENST00000603596 712 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC079880.2-201ENST00000603790 1213 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AP004372.1-201ENST00000604842 844 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AL021368.3-201ENST00000607119 578 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AL008723.3-201ENST00000608926 449 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AL592494.3-201ENST00000609485 464 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC079395.3-201ENST00000615161 484 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC022079.1-201ENST00000621546 602 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX18Q96RF0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX18Q96RF0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX18Q96RF0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SNX18Q96RF0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX18Q96RF0 AL121768.1-201ENST00000613917 2544 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 AC006600.2-201ENST00000624834 2506 ntBASIC5.69□□□□□ -1.5
SNX18Q96RF0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC015689.2-201ENST00000528172 1738 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL356317.1-201ENST00000396110 1436 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 RNFT1P3-201ENST00000340898 1052 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 RPL22P22-201ENST00000395439 379 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 TAF9BP2-201ENST00000400856 499 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL133260.1-201ENST00000405720 405 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL355615.1-201ENST00000406187 641 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 OR51B3P-201ENST00000412287 913 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 TATDN1P1-201ENST00000414123 891 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC241520.1-201ENST00000422654 1099 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC002069.1-201ENST00000429649 1159 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC006994.1-201ENST00000438212 839 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL445687.2-201ENST00000458156 728 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 HMGB1P38-201ENST00000490557 577 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 OR5H3P-201ENST00000502817 919 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC010343.2-201ENST00000510162 224 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 SNORA19.3-201ENST00000516165 130 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC009729.1-201ENST00000548873 1133 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC037479.1-201ENST00000558361 625 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 MIR3189-201ENST00000578735 73 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 DHFRP1-201ENST00000579682 559 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 SYPL1P2-201ENST00000582878 727 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX18Q96RF0 AL157392.4-201ENST00000609756 345 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 AC015722.2-201ENST00000622210 551 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 LINC02495-203ENST00000636704 242 ntBASIC5.68□□□□□ -1.5
SNX18Q96RF0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX18Q96RF0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms