Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6□□□□□ -1.45
VPS50Q96JG6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6□□□□□ -1.45
VPS50Q96JG6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6□□□□□ -1.45
VPS50Q96JG6 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6□□□□□ -1.45
VPS50Q96JG6 AC008126.1-201ENST00000549019 480 ntBASIC6□□□□□ -1.45
VPS50Q96JG6 LINC00556-201ENST00000569603 412 ntBASIC6□□□□□ -1.45
VPS50Q96JG6 MIR4310-201ENST00000582950 57 ntBASIC6□□□□□ -1.45
VPS50Q96JG6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6□□□□□ -1.45
VPS50Q96JG6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6□□□□□ -1.45
VPS50Q96JG6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 AC063944.3-201ENST00000609969 533 ntBASIC6□□□□□ -1.45
VPS50Q96JG6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 AC008993.2-201ENST00000631744 806 ntBASIC6□□□□□ -1.45
VPS50Q96JG6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
VPS50Q96JG6 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VPS50Q96JG6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VPS50Q96JG6 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6□□□□□ -1.45
VPS50Q96JG6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 SNORD35A-201ENST00000363389 86 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL121835.1-201ENST00000404250 354 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL356968.2-201ENST00000412769 1257 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 RPL12P16-201ENST00000431098 498 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL512661.1-201ENST00000434586 1253 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 CXCR2P1-202ENST00000443392 1074 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 RPS3AP53-201ENST00000454716 778 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC104339.1-201ENST00000465478 348 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 RN7SL205P-201ENST00000490174 284 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 OR9N1P-202ENST00000494289 481 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC106822.1-201ENST00000502647 526 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 PRMT5P1-201ENST00000514351 598 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 IGKV1D-22-201ENST00000518953 324 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 HMGB1P46-201ENST00000520062 610 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 UBTFL9-201ENST00000534504 1148 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC233266.2-201ENST00000567067 528 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC090651.1-201ENST00000567865 634 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC019322.1-201ENST00000571869 389 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 TXNP4-201ENST00000575018 310 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AP001357.1-201ENST00000586304 1053 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC010487.1-201ENST00000594408 1172 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL021368.3-201ENST00000607119 578 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 OR8G7P-201ENST00000616658 848 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL445528.2-201ENST00000620582 470 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC025262.3-201ENST00000623666 360 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC004808.1-201ENST00000627671 721 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL359955.1-201ENST00000455242 3275 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.99□□□□□ -1.45
VPS50Q96JG6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS50Q96JG6 SAGE3P-201ENST00000619800 1635 ntBASIC5.99□□□□□ -1.45
VPS50Q96JG6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS50Q96JG6 GUCY1B2-204ENST00000531898 1979 ntBASIC5.98□□□□□ -1.45
VPS50Q96JG6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS50Q96JG6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms