Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 RN7SL817P-201ENST00000480777 288 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 DPPA3P2-201ENST00000553589 478 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 ELOCP28-201ENST00000590044 317 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AL360012.1-201ENST00000602813 131 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC087783.2-201ENST00000605070 562 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 PWAR1-201ENST00000624188 2414 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 MT-RNR2-201ENST00000387347 1559 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AL162456.1-201ENST00000634535 2006 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 RNGTTP1-201ENST00000420965 728 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 LINC02210-201ENST00000444561 288 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 RN7SL72P-201ENST00000460697 269 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 RPS23P2-201ENST00000463671 415 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AC024558.1-201ENST00000505008 528 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 RNA5SP116-201ENST00000516132 98 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 OR8Q1P-201ENST00000526467 655 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 AL359715.3-201ENST00000569267 2123 ntBASIC5.71□□□□□ -1.5
SHROOM3Q8TF72 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 RNA5SP507-201ENST00000363603 121 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AC096921.1-201ENST00000411661 375 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 NENFP1-201ENST00000419476 466 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AL390119.1-201ENST00000440329 312 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 RN7SL172P-201ENST00000460535 303 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 RPS21P4-201ENST00000487122 248 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 GSTP1P1-201ENST00000548078 319 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AL352984.2-202ENST00000613699 155 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 CU639417.4-201ENST00000623928 207 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 CASC19-260ENST00000641828 2001 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 MSL3P1-202ENST00000440028 1468 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 AL355488.2-201ENST00000609909 2850 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 MRRFP1-201ENST00000435941 1675 ntBASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SHROOM3Q8TF72 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AL133270.1-201ENST00000402635 279 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 METTL15P3-201ENST00000415522 1221 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AL450023.1-201ENST00000450868 751 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 SNORD125-201ENST00000459538 96 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC074087.1-201ENST00000512059 724 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC130364.2-201ENST00000528639 604 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 MIR4420-201ENST00000583944 77 ntBASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHROOM3Q8TF72 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms