Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 RN7SKP147-201ENST00000517154 244 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.67□□□□□ -1.34
SNED1Q8TER0 AL022394.1-201ENST00000606979 292 ntBASIC6.67□□□□□ -1.34
SNED1Q8TER0 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNED1Q8TER0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 SNORA11-201ENST00000408789 128 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 NANOGP9-201ENST00000439890 892 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 AC092647.2-201ENST00000452998 253 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 RSU1P1-201ENST00000453416 441 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 AC079080.1-201ENST00000479841 822 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 MTND6P2-201ENST00000512226 524 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 AC112694.2-201ENST00000623697 768 ntBASIC6.66□□□□□ -1.34
SNED1Q8TER0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.66□□□□□ -1.34
SNED1Q8TER0 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SNED1Q8TER0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
SNED1Q8TER0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SNED1Q8TER0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
SNED1Q8TER0 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 AC026951.1-201ENST00000559530 2459 ntBASIC6.65□□□□□ -1.34
SNED1Q8TER0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SNED1Q8TER0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SNED1Q8TER0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC006206.1-201ENST00000544842 3387 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 LCOR-201ENST00000286067 4542 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 RNA5SP123-201ENST00000363244 119 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 RAB28P1-201ENST00000411517 641 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 RPSAP35-201ENST00000413753 818 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 RPS26P38-201ENST00000414476 348 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 GSTM5P1-201ENST00000434751 660 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AL390879.1-201ENST00000439143 386 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC004980.4-201ENST00000513375 203 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AL671862.1-201ENST00000515851 349 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC079075.1-201ENST00000559543 878 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC234771.5-201ENST00000600161 514 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AC012557.1-201ENST00000607115 611 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AL627230.1-201ENST00000613077 211 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 AL591926.8-201ENST00000616876 211 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AL034408.1-201ENST00000637712 664 ntBASIC6.65□□□□□ -1.35
SNED1Q8TER0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.65□□□□□ -1.35
SNED1Q8TER0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SNED1Q8TER0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms