Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 OR4F13P-202ENST00000560066 2054 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 MIR137-201ENST00000385223 102 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 RPSAP35-201ENST00000413753 818 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC068491.1-201ENST00000449539 1241 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 NPM1P19-201ENST00000450070 712 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 DEFB109A-201ENST00000482450 265 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 RN7SL570P-201ENST00000484405 292 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 OR11I1P-201ENST00000486033 954 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 DUTP7-201ENST00000507982 486 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC074255.1-201ENST00000511259 501 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC021678.3-201ENST00000517893 476 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC011853.1-201ENST00000518911 454 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC122688.1-201ENST00000541494 223 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC010503.3-201ENST00000594355 540 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 COX6CP7-201ENST00000597056 208 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AL139041.1-201ENST00000605480 610 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AP001052.1-201ENST00000626421 99 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC083843.2-201ENST00000568248 6253 ntBASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLHC1Q8NHS4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SNORA5.1-201ENST00000384275 131 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC110602.1-201ENST00000437414 318 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AL359265.1-201ENST00000440296 795 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 LINC02210-201ENST00000444561 288 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AP002884.1-201ENST00000479691 655 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 RPL9P15-201ENST00000491096 532 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 EIF4E2P2-201ENST00000492033 736 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC025458.1-201ENST00000506046 166 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 RN7SKP253-201ENST00000516424 309 ntBASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.37□□□□□ -1.55
CLHC1Q8NHS4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms