Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC007342.5-201ENST00000571340 2142 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 SRRM1P3-201ENST00000426911 2678 ntBASIC6.22□□□□□ -1.41
CCDC65Q8IXS2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC65Q8IXS2 AC144833.1-201ENST00000567953 4089 ntBASIC6.21□□□□□ -1.41
CCDC65Q8IXS2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CCDC65Q8IXS2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC65Q8IXS2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC65Q8IXS2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AC092681.1-201ENST00000297369 291 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 RNA5SP453-201ENST00000362503 119 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 GNG5P5-201ENST00000420444 220 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 OR52E7P-201ENST00000452394 933 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 PSAT1P4-201ENST00000466500 526 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 UBFD1P1-201ENST00000473259 814 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 SNORA43.3-201ENST00000517240 103 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 MIR6778-201ENST00000617912 73 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AC091305.2-201ENST00000624049 1576 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 OR13C1P-202ENST00000641378 2919 ntBASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCDC65Q8IXS2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AC104964.3-201ENST00000606115 2860 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AL445213.1-201ENST00000412589 747 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AL158827.1-201ENST00000416300 391 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AC093155.2-201ENST00000420734 937 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 RPL34P3-201ENST00000421454 338 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 IPPKP1-201ENST00000422501 768 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 RIMKLBP2-201ENST00000424737 654 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 BX119321.1-201ENST00000428912 797 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AL450996.1-201ENST00000445574 1202 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AC084754.1-201ENST00000463466 464 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 RN7SL197P-201ENST00000466981 299 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 RN7SL188P-201ENST00000469842 285 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 OR51C1P-201ENST00000608504 942 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 RNA5SP439-201ENST00000617595 124 ntBASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC65Q8IXS2 LINC01963-201ENST00000562038 3148 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 RAB5CP1-201ENST00000395972 580 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 OR2AT2P-201ENST00000413438 905 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AL662874.1-201ENST00000426065 230 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AL138899.2-201ENST00000439139 499 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 IGBP1P3-201ENST00000447449 1000 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 NPM1P19-201ENST00000450070 712 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 RN7SL72P-201ENST00000460697 269 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 PSMA2P2-201ENST00000504319 686 ntBASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC65Q8IXS2 AC109481.1-201ENST00000509173 282 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms