Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC097504.2-201ENST00000608088 454 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC096861.1-201ENST00000616652 240 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL355974.3-201ENST00000617383 467 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AL645927.2-201ENST00000618350 349 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC022960.3-201ENST00000619794 441 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC090772.4-201ENST00000623599 362 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC079776.5-201ENST00000641920 211 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AC104964.3-201ENST00000606115 2860 ntBASIC5.32□□□□□ -1.56
SHFQ7M4L6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.32□□□□□ -1.56
SHFQ7M4L6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHFQ7M4L6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 SNORA64.3-201ENST00000365647 134 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 ATP5F1P6-201ENST00000402768 767 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC092570.3-201ENST00000420113 693 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 ARL2BPP3-201ENST00000421226 480 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 MRPL50P1-201ENST00000431951 384 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC099670.2-201ENST00000435130 321 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC242426.1-201ENST00000435270 960 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC245517.2-201ENST00000442890 346 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC016027.4-201ENST00000450866 277 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 PFN1P6-201ENST00000476786 399 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC138409.2-202ENST00000507274 458 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 SNX18P25-201ENST00000510539 758 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 RNA5SP96-201ENST00000516041 107 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 NOP56P3-201ENST00000549457 385 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AL121839.1-201ENST00000556233 1185 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 MIR3157-201ENST00000578688 85 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC005242.1-201ENST00000585658 438 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC245884.10-201ENST00000597355 337 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AL645933.2-201ENST00000606743 1207 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC034229.4-201ENST00000607861 441 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC018690.1-201ENST00000608144 626 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AF129408.1-201ENST00000608767 431 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 MIR6885-201ENST00000612241 66 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC089999.3-201ENST00000622440 577 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 AL158152.1-201ENST00000602652 1435 ntBASIC5.31□□□□□ -1.56
SHFQ7M4L6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHFQ7M4L6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.31□□□□□ -1.56
SHFQ7M4L6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHFQ7M4L6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHFQ7M4L6 AC006484.1-201ENST00000435086 1884 ntBASIC5.3□□□□□ -1.56
SHFQ7M4L6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms