Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC245052.7-201ENST00000601161 359 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC027334.1-201ENST00000603257 310 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC005229.3-201ENST00000603438 323 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC089999.3-201ENST00000622440 577 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC003992.1-201ENST00000635364 557 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC004076.2-201ENST00000620532 3323 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AL450326.2-201ENST00000421913 1962 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC091305.2-201ENST00000624049 1576 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC009313.2-201ENST00000417893 1941 ntBASIC5.29□□□□□ -1.56
C11orf88Q6PI97 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
C11orf88Q6PI97 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 PPIAP24-201ENST00000328558 471 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 MIR133A2-201ENST00000347538 102 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RNA5SP85-201ENST00000365378 119 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC048351.1-201ENST00000420064 602 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AL590623.1-201ENST00000427864 105 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC002069.1-201ENST00000429649 1159 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RPSAP65-201ENST00000429660 595 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 TRIM60P13-201ENST00000432350 1283 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RPS3AP38-201ENST00000435889 763 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RPS27AP3-201ENST00000453803 454 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RPL7AP52-201ENST00000458096 790 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC093870.1-201ENST00000506837 213 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 ST13P12-201ENST00000508958 1094 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 COX6B1P4-201ENST00000519826 484 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 NPM1P47-201ENST00000560843 856 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC025857.2-201ENST00000602711 238 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 KATNBL1P1-201ENST00000605192 748 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC004890.3-201ENST00000605566 1095 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 SNORA74.4-201ENST00000607595 199 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RNA5SP439-201ENST00000617595 124 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 MIR6823-201ENST00000622118 61 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC073593.1-201ENST00000624500 411 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LINC01613-201ENST00000561476 2780 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.28□□□□□ -1.56
C11orf88Q6PI97 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
C11orf88Q6PI97 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
C11orf88Q6PI97 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms