Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 RN7SKP6-201ENST00000364795 319 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 SNORA16A-201ENST00000384342 137 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 MIR551A-201ENST00000385042 96 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 SDHDP6-201ENST00000414693 480 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AL133482.1-201ENST00000415988 498 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC104843.2-201ENST00000427666 297 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC023271.1-201ENST00000445936 1090 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC073909.1-201ENST00000447112 999 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 RN7SL197P-201ENST00000466981 299 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 CR383656.1-201ENST00000484916 377 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 GTF2IP11-201ENST00000526931 420 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC020978.7-201ENST00000575953 1187 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 AC021766.1-201ENST00000624404 741 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN20Q4JDL3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC099654.3-201ENST00000447087 1546 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 RNA5SP234-201ENST00000363916 119 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 SNORD56.6-201ENST00000384569 71 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 NPM1P38-201ENST00000403835 865 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 MTND2P40-201ENST00000436718 841 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AL390119.1-201ENST00000440329 312 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 RPS27AP2-201ENST00000457576 465 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 MTATP6P1-201ENST00000514057 681 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC079064.1-201ENST00000528365 362 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC007786.3-201ENST00000615154 596 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC126175.1-201ENST00000617041 758 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AL512356.3-201ENST00000623005 461 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 AC016745.2-201ENST00000608834 3443 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 BCORP1-203ENST00000513194 5093 ntBASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPN20Q4JDL3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 AC100757.1-201ENST00000616872 1835 ntBASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 AL592429.1-201ENST00000403909 1473 ntBASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 AC083837.1-201ENST00000565297 2994 ntBASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 SNORA70.6-201ENST00000383934 134 ntBASIC5.78□□□□□ -1.48
PTPN20Q4JDL3 PPIAP9-201ENST00000403866 498 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms