Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 RN7SKP279-201ENST00000411383 298 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AL360013.1-201ENST00000419031 858 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 CXCR2P1-202ENST00000443392 1074 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC092106.1-201ENST00000444291 373 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 POU5F1P5-201ENST00000445059 658 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 CASP3P1-201ENST00000446037 609 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN1BQ07699 RBMY2HP-201ENST00000457961 720 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 RPSAP37-201ENST00000470913 821 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 EIF3LP3-201ENST00000495197 822 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 RBBP4P1-201ENST00000502424 1276 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 CCDC11P1-201ENST00000503137 1162 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC093816.1-201ENST00000515076 913 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 Y_RNA.710-201ENST00000516975 110 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 CYCSP25-201ENST00000525280 316 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC124891.1-201ENST00000536322 519 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 DYNLL1P1-201ENST00000595442 269 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AL589765.6-201ENST00000601909 549 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC015802.5-201ENST00000607478 399 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 SNORA74.4-201ENST00000607595 199 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AC135803.1-201ENST00000608748 565 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC022106.1-201ENST00000612834 766 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AL355974.3-201ENST00000617383 467 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AL137067.2-201ENST00000621202 131 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 AL138693.1-201ENST00000622219 129 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 THAP12P9-201ENST00000503971 2360 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SCN1BQ07699 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC217777.1-201ENST00000570034 1471 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 RNA5SP375-201ENST00000362975 119 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 U3.7-201ENST00000363668 216 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 SNORA43.1-201ENST00000364863 140 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 CRIP1P1-201ENST00000427567 185 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 AC242426.1-201ENST00000435270 960 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AC245291.3-201ENST00000443400 292 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 RPS23P9-201ENST00000448848 438 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 AL445991.1-201ENST00000450381 475 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 RN7SL326P-201ENST00000477493 296 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 OR52A4P-202ENST00000481634 799 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 HMGB1P3-201ENST00000502802 616 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN1BQ07699 RNU6-1308P-201ENST00000516817 103 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 HIGD1AP18-201ENST00000520730 278 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN1BQ07699 TDGP1-201ENST00000543961 1229 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AP001496.3-201ENST00000580230 913 ntBASIC5.23□□□□□ -1.57
SCN1BQ07699 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN1BQ07699 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SCN1BQ07699 AL513327.3-201ENST00000602618 469 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms