Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX4Q06945 RPL7L1P3-201ENST00000455249 689 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 GTF2IP12-201ENST00000456547 356 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 AL024509.2-201ENST00000493462 493 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC106822.1-201ENST00000502647 526 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX4Q06945 RNU6-528P-201ENST00000516926 100 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX4Q06945 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.17□□□□□ -1.26
SOX4Q06945 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX4Q06945 NMNAT1P5-201ENST00000559657 841 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC004232.1-201ENST00000571388 208 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 ISCA1P3-201ENST00000577104 373 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 AC011921.2-201ENST00000589465 152 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 AL049840.6-201ENST00000604583 345 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC019257.2-201ENST00000605539 497 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC006270.3-201ENST00000605967 1036 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 Z99129.1-201ENST00000612510 255 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC107075.1-201ENST00000613695 314 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC104985.2-201ENST00000620598 500 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC120057.5-201ENST00000623840 154 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AL512310.3-201ENST00000547023 1335 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX4Q06945 AL929601.4-201ENST00000613011 1341 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SOX4Q06945 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.17□□□□□ -1.26
SOX4Q06945 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 AC119674.1-213ENST00000641177 1386 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 MAPK10-357ENST00000641831 2858 ntBASIC7.17□□□□□ -1.26
SOX4Q06945 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.17□□□□□ -1.26
SOX4Q06945 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.17□□□□□ -1.26
SOX4Q06945 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.17□□□□□ -1.26
SOX4Q06945 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX4Q06945 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX4Q06945 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SOX4Q06945 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SOX4Q06945 U3.4-201ENST00000363352 213 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 RN7SKP250-201ENST00000363924 321 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX4Q06945 Y_RNA.465-201ENST00000384293 102 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 AC099535.1-201ENST00000408928 371 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SOX4Q06945 RNU6-920P-201ENST00000410926 92 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 OR4K6P-201ENST00000416478 897 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.16□□□□□ -1.26
SOX4Q06945 AL139184.1-202ENST00000422303 222 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 VDAC1P2-201ENST00000423609 850 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 MTND3P23-201ENST00000431980 347 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX4Q06945 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 AL603882.1-201ENST00000463059 681 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 RN7SL413P-201ENST00000482700 297 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 RN7SL568P-201ENST00000493069 298 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 AC004069.2-201ENST00000505438 1114 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 GTF2F2P1-201ENST00000511083 675 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX4Q06945 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.16□□□□□ -1.26
SOX4Q06945 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX4Q06945 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX4Q06945 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 ZNF519P3-201ENST00000557158 1032 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 AC037479.1-201ENST00000558361 625 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX4Q06945 AC090616.1-201ENST00000583895 447 ntBASIC7.16□□□□□ -1.26
SOX4Q06945 OR4G1P-201ENST00000588632 938 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms