Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL731532.1-201ENST00000623972 4236 ntBASIC6.49□□□□□ -1.37
GABPAQ06546 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.49□□□□□ -1.37
GABPAQ06546 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
GABPAQ06546 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABPAQ06546 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.48□□□□□ -1.37
GABPAQ06546 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.48□□□□□ -1.37
GABPAQ06546 AC005294.1-201ENST00000355509 281 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 SNORA70.9-201ENST00000384370 135 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.48□□□□□ -1.37
GABPAQ06546 RPSAP35-201ENST00000413753 818 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 AL133325.1-201ENST00000421090 382 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.48□□□□□ -1.37
GABPAQ06546 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 RN7SL222P-201ENST00000476452 299 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.48□□□□□ -1.37
GABPAQ06546 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.48□□□□□ -1.37
GABPAQ06546 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.48□□□□□ -1.37
GABPAQ06546 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.48□□□□□ -1.37
GABPAQ06546 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.48□□□□□ -1.37
GABPAQ06546 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.48□□□□□ -1.37
GABPAQ06546 AP003789.1-201ENST00000617737 605 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
GABPAQ06546 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
GABPAQ06546 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
GABPAQ06546 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
GABPAQ06546 AC006206.1-201ENST00000544842 3387 ntBASIC6.48□□□□□ -1.37
GABPAQ06546 AC007938.2-201ENST00000604666 2634 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 AC018809.2-201ENST00000602436 3823 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.47□□□□□ -1.37
GABPAQ06546 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.47□□□□□ -1.37
GABPAQ06546 OR4F13P-202ENST00000560066 2054 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
GABPAQ06546 AL133388.1-201ENST00000404509 287 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.47□□□□□ -1.37
GABPAQ06546 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.47□□□□□ -1.37
GABPAQ06546 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.47□□□□□ -1.37
GABPAQ06546 AZGP1P2-201ENST00000454506 345 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 SNORD125-201ENST00000459538 96 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.47□□□□□ -1.37
GABPAQ06546 RPL7P6-201ENST00000480903 738 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 RPL7P39-201ENST00000481157 744 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 AC004815.1-201ENST00000484185 331 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 RN7SL447P-201ENST00000494711 245 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 AC122688.1-201ENST00000541494 223 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 RBM22P1-201ENST00000578589 1214 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
GABPAQ06546 SAMMSON-227ENST00000642114 1199 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.47□□□□□ -1.37
GABPAQ06546 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.47□□□□□ -1.37
GABPAQ06546 ZNF658B-201ENST00000602828 3408 ntBASIC6.47□□□□□ -1.37
GABPAQ06546 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GABPAQ06546 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.47□□□□□ -1.37
GABPAQ06546 AC083899.1-201ENST00000454465 3819 ntBASIC6.46□□□□□ -1.37
GABPAQ06546 NR1H5P-201ENST00000452683 1377 ntBASIC6.46□□□□□ -1.37
GABPAQ06546 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.37
GABPAQ06546 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.46□□□□□ -1.37
GABPAQ06546 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
GABPAQ06546 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
GABPAQ06546 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
GABPAQ06546 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
GABPAQ06546 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.46□□□□□ -1.38
GABPAQ06546 MIR223-201ENST00000385204 110 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.46□□□□□ -1.38
GABPAQ06546 AC007394.1-201ENST00000421941 531 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 AC108075.1-201ENST00000424692 529 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 BX679664.2-201ENST00000439282 283 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.46□□□□□ -1.38
GABPAQ06546 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.46□□□□□ -1.38
GABPAQ06546 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
GABPAQ06546 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GABPAQ06546 HMGB1P44-201ENST00000508597 572 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.46□□□□□ -1.38
GABPAQ06546 UGT2B24P-201ENST00000514441 1597 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 RN7SKP99-201ENST00000517028 307 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.46□□□□□ -1.38
GABPAQ06546 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
GABPAQ06546 OR5AM1P-201ENST00000532136 1032 ntBASIC6.46□□□□□ -1.38
GABPAQ06546 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms