Protein–RNA interactions for Protein: Q03468

ERCC6, DNA excision repair protein ERCC-6, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6Q03468 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.34□□□□□ -0.91
ERCC6Q03468 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC9.34□□□□□ -0.91
ERCC6Q03468 AC090424.1-201ENST00000535243 736 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
ERCC6Q03468 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 AC125494.2-201ENST00000602431 657 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
ERCC6Q03468 AL132640.2-201ENST00000559968 1698 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
ERCC6Q03468 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC9.34□□□□□ -0.91
ERCC6Q03468 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
ERCC6Q03468 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC9.34□□□□□ -0.91
ERCC6Q03468 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC9.34□□□□□ -0.91
ERCC6Q03468 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
ERCC6Q03468 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC9.34□□□□□ -0.91
ERCC6Q03468 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.34□□□□□ -0.91
ERCC6Q03468 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC9.34□□□□□ -0.91
ERCC6Q03468 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC9.34□□□□□ -0.91
ERCC6Q03468 GTF2F2P1-201ENST00000511083 675 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 RNA5SP373-201ENST00000517271 95 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 SCARNA9-201ENST00000530422 353 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.34□□□□□ -0.91
ERCC6Q03468 AC084824.1-201ENST00000550917 1005 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.34□□□□□ -0.91
ERCC6Q03468 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ERCC6Q03468 MIR132-201ENST00000591554 101 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 AL391358.1-201ENST00000605342 190 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 AC024589.2-201ENST00000605642 1294 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 MLECP1-201ENST00000615893 709 ntBASIC9.34□□□□□ -0.91
ERCC6Q03468 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
ERCC6Q03468 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
ERCC6Q03468 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC9.33□□□□□ -0.92
ERCC6Q03468 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
ERCC6Q03468 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
ERCC6Q03468 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
ERCC6Q03468 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ERCC6Q03468 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
ERCC6Q03468 RPL10P10-201ENST00000403509 664 ntBASIC9.33□□□□□ -0.92
ERCC6Q03468 RPS27AP7-201ENST00000422792 455 ntBASIC9.33□□□□□ -0.92
ERCC6Q03468 snoU13.22-201ENST00000459428 104 ntBASIC9.33□□□□□ -0.92
ERCC6Q03468 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC9.33□□□□□ -0.92
ERCC6Q03468 AL109766.1-201ENST00000555080 552 ntBASIC9.33□□□□□ -0.92
ERCC6Q03468 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
ERCC6Q03468 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.33□□□□□ -0.92
ERCC6Q03468 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
ERCC6Q03468 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.33□□□□□ -0.92
ERCC6Q03468 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
ERCC6Q03468 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
ERCC6Q03468 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.32□□□□□ -0.92
ERCC6Q03468 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ERCC6Q03468 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ERCC6Q03468 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
ERCC6Q03468 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC9.32□□□□□ -0.92
ERCC6Q03468 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ERCC6Q03468 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ERCC6Q03468 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ERCC6Q03468 CASC19-205ENST00000641013 1411 ntBASIC9.32□□□□□ -0.92
ERCC6Q03468 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.32□□□□□ -0.92
ERCC6Q03468 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
ERCC6Q03468 RN7SKP263-201ENST00000411194 309 ntBASIC9.32□□□□□ -0.92
ERCC6Q03468 AL451062.2-201ENST00000427515 271 ntBASIC9.32□□□□□ -0.92
ERCC6Q03468 AC096775.1-201ENST00000437724 448 ntBASIC9.32□□□□□ -0.92
ERCC6Q03468 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ERCC6Q03468 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC9.32□□□□□ -0.92
ERCC6Q03468 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC9.32□□□□□ -0.92
ERCC6Q03468 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
ERCC6Q03468 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC9.32□□□□□ -0.92
ERCC6Q03468 NXF4-202ENST00000416098 1465 ntBASIC9.32□□□□□ -0.92
ERCC6Q03468 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
ERCC6Q03468 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.32□□□□□ -0.92
ERCC6Q03468 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC9.32□□□□□ -0.92
ERCC6Q03468 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ERCC6Q03468 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
ERCC6Q03468 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ERCC6Q03468 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
ERCC6Q03468 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
ERCC6Q03468 RNA5-8SP7-201ENST00000363443 155 ntBASIC9.31□□□□□ -0.92
ERCC6Q03468 AL591848.1-201ENST00000413092 322 ntBASIC9.31□□□□□ -0.92
ERCC6Q03468 AC073143.1-201ENST00000436316 395 ntBASIC9.31□□□□□ -0.92
ERCC6Q03468 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.31□□□□□ -0.92
ERCC6Q03468 AC140172.1-201ENST00000502928 141 ntBASIC9.31□□□□□ -0.92
ERCC6Q03468 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC9.31□□□□□ -0.92
ERCC6Q03468 AC008785.1-201ENST00000624475 456 ntBASIC9.31□□□□□ -0.92
ERCC6Q03468 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.31□□□□□ -0.92
ERCC6Q03468 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms