Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HSPG2P98160 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC3.25□□□□□ -1.89
HSPG2P98160 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 AL139039.2-201ENST00000407436 479 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 AL356390.1-201ENST00000455684 397 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 AC013356.1-201ENST00000489027 564 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 AL034374.2-201ENST00000605281 548 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 MFSD8-220ENST00000641243 1422 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.25□□□□□ -1.89
HSPG2P98160 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 RNA5SP28-201ENST00000363841 119 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HSPG2P98160 AL445189.1-201ENST00000405722 338 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 AC096921.1-201ENST00000411661 375 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.25□□□□□ -1.89
HSPG2P98160 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 OLMALINC-203ENST00000641087 3779 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HSPG2P98160 RN7SKP145-201ENST00000363291 303 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 RN7SKP224-201ENST00000364140 325 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 RAD23BP1-201ENST00000421404 1227 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC3.25□□□□□ -1.89
HSPG2P98160 AC011276.1-201ENST00000469688 323 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 AL121873.1-201ENST00000616013 524 ntBASIC3.25□□□□□ -1.89
HSPG2P98160 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HSPG2P98160 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
HSPG2P98160 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 MIR551A-201ENST00000385042 96 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 MIR670-201ENST00000390142 98 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC3.24□□□□□ -1.89
HSPG2P98160 AL158073.1-201ENST00000426848 1104 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.24□□□□□ -1.89
HSPG2P98160 RPS17P2-201ENST00000461663 408 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.24□□□□□ -1.89
HSPG2P98160 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.24□□□□□ -1.89
HSPG2P98160 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 AC027334.1-201ENST00000603257 310 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 AL139041.1-201ENST00000605480 610 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 RAD17P2-201ENST00000451754 1977 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC3.24□□□□□ -1.89
HSPG2P98160 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HSPG2P98160 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC3.24□□□□□ -1.89
HSPG2P98160 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HSPG2P98160 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HSPG2P98160 OR4K15-201ENST00000305051 1216 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 MIR129-1-201ENST00000384972 72 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HSPG2P98160 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.24□□□□□ -1.89
HSPG2P98160 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
HSPG2P98160 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms