Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR6503-201ENST00000622884 86 ntBASIC4.24□□□□□ -1.73
CCL20P78556 AC117503.3-201ENST00000623811 601 ntBASIC4.24□□□□□ -1.73
CCL20P78556 AL355480.4-201ENST00000626823 69 ntBASIC4.24□□□□□ -1.73
CCL20P78556 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCL20P78556 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.24□□□□□ -1.73
CCL20P78556 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCL20P78556 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCL20P78556 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCL20P78556 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.24□□□□□ -1.73
CCL20P78556 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.24□□□□□ -1.73
CCL20P78556 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCL20P78556 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCL20P78556 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.24□□□□□ -1.73
CCL20P78556 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.24□□□□□ -1.73
CCL20P78556 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.24□□□□□ -1.73
CCL20P78556 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 AC019072.1-201ENST00000604535 1551 ntBASIC4.23□□□□□ -1.73
CCL20P78556 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.23□□□□□ -1.73
CCL20P78556 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCL20P78556 OOSP1-201ENST00000398992 1270 ntBASIC4.23□□□□□ -1.73
CCL20P78556 PRELID1P1-201ENST00000403549 660 ntBASIC4.23□□□□□ -1.73
CCL20P78556 RN7SKP117-201ENST00000410175 264 ntBASIC4.23□□□□□ -1.73
CCL20P78556 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 NENFP1-201ENST00000419476 466 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AC128677.1-201ENST00000436016 442 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.23□□□□□ -1.73
CCL20P78556 NPM1P9-201ENST00000453156 844 ntBASIC4.23□□□□□ -1.73
CCL20P78556 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.23□□□□□ -1.73
CCL20P78556 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 RN7SL447P-201ENST00000494711 245 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.23□□□□□ -1.73
CCL20P78556 RPS24P16-201ENST00000497294 392 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 GAPDHP71-201ENST00000511530 1003 ntBASIC4.23□□□□□ -1.73
CCL20P78556 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.23□□□□□ -1.73
CCL20P78556 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.23□□□□□ -1.73
CCL20P78556 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCL20P78556 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.23□□□□□ -1.73
CCL20P78556 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.23□□□□□ -1.73
CCL20P78556 DPRXP4-201ENST00000578053 568 ntBASIC4.23□□□□□ -1.73
CCL20P78556 RN7SL32P-201ENST00000580514 281 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 MIR4260-201ENST00000583107 67 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 AC006272.2-201ENST00000594725 163 ntBASIC4.23□□□□□ -1.73
CCL20P78556 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.23□□□□□ -1.73
CCL20P78556 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 AC103564.3-201ENST00000621194 220 ntBASIC4.23□□□□□ -1.73
CCL20P78556 AL136228.1-201ENST00000622221 319 ntBASIC4.23□□□□□ -1.73
CCL20P78556 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 CDY3P-201ENST00000454543 1618 ntBASIC4.23□□□□□ -1.73
CCL20P78556 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCL20P78556 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.23□□□□□ -1.73
CCL20P78556 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCL20P78556 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.23□□□□□ -1.73
CCL20P78556 AL162456.1-201ENST00000634535 2006 ntBASIC4.22□□□□□ -1.73
CCL20P78556 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 AC116158.1-201ENST00000560231 2129 ntBASIC4.22□□□□□ -1.73
CCL20P78556 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CCL20P78556 AL049869.1-201ENST00000556933 1402 ntBASIC4.22□□□□□ -1.73
CCL20P78556 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.22□□□□□ -1.73
CCL20P78556 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.22□□□□□ -1.73
CCL20P78556 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCL20P78556 RNA5SP30-201ENST00000365552 115 ntBASIC4.22□□□□□ -1.73
CCL20P78556 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.22□□□□□ -1.73
CCL20P78556 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.22□□□□□ -1.73
CCL20P78556 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.22□□□□□ -1.73
CCL20P78556 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.22□□□□□ -1.73
CCL20P78556 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.22□□□□□ -1.73
CCL20P78556 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.22□□□□□ -1.73
CCL20P78556 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.22□□□□□ -1.73
CCL20P78556 AC019185.3-201ENST00000438805 323 ntBASIC4.22□□□□□ -1.73
CCL20P78556 ARMC4P1-201ENST00000438905 707 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms