Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RARSP1-201ENST00000542842 1418 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RHBDL3P58872 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RHBDL3P58872 AL159987.1-201ENST00000347911 293 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AL391422.1-201ENST00000402155 436 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 BMS1P13-201ENST00000417301 885 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.96□□□□□ -1.3
RHBDL3P58872 MTATP6P11-201ENST00000428071 670 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 DEFA9P-201ENST00000433042 285 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AC021146.7-201ENST00000509604 775 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 RNU6-615P-201ENST00000516065 106 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AC139365.2-201ENST00000517972 253 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 OR8K2P-201ENST00000524645 927 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.96□□□□□ -1.3
RHBDL3P58872 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AL683813.2-201ENST00000605245 502 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AL451049.1-201ENST00000608672 497 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 BX323046.1-201ENST00000610145 535 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AC073575.2-201ENST00000614212 627 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 AP001885.1-201ENST00000621658 558 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 OR5AC4P-202ENST00000642086 985 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 AL662795.2-201ENST00000624252 3706 ntBASIC6.96□□□□□ -1.3
RHBDL3P58872 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
RHBDL3P58872 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RHBDL3P58872 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
RHBDL3P58872 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RHBDL3P58872 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.96□□□□□ -1.3
RHBDL3P58872 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RHBDL3P58872 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.96□□□□□ -1.3
RHBDL3P58872 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.96□□□□□ -1.3
RHBDL3P58872 MRE11P1-201ENST00000464884 2127 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.95□□□□□ -1.3
RHBDL3P58872 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
RHBDL3P58872 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.95□□□□□ -1.3
RHBDL3P58872 RN7SKP160-201ENST00000363804 340 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 OR2W4P-201ENST00000406496 926 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 SNORA11B-201ENST00000408175 129 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 OR3A2-201ENST00000408891 1076 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 GTF3AP1-201ENST00000416942 1004 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.95□□□□□ -1.3
RHBDL3P58872 OR5W1P-201ENST00000423705 938 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 AC016027.5-201ENST00000427227 210 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.95□□□□□ -1.3
RHBDL3P58872 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.95□□□□□ -1.3
RHBDL3P58872 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.95□□□□□ -1.3
RHBDL3P58872 RN7SL72P-201ENST00000460697 269 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 AL603882.1-201ENST00000463059 681 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 PFN1P6-201ENST00000476786 399 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 CR383656.1-201ENST00000484916 377 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 RPS4XP14-201ENST00000493072 781 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 OR9N1P-202ENST00000494289 481 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 AC021087.2-201ENST00000504656 1203 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.95□□□□□ -1.3
RHBDL3P58872 MIR2117-201ENST00000516780 80 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 SCARNA6.1-201ENST00000516989 238 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.95□□□□□ -1.3
RHBDL3P58872 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.95□□□□□ -1.3
RHBDL3P58872 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 AL358913.1-201ENST00000554342 121 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.95□□□□□ -1.3
RHBDL3P58872 AC007225.2-201ENST00000562529 256 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.95□□□□□ -1.3
RHBDL3P58872 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.95□□□□□ -1.3
RHBDL3P58872 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.95□□□□□ -1.3
RHBDL3P58872 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.95□□□□□ -1.3
RHBDL3P58872 AL137246.2-201ENST00000613439 662 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 AC232271.1-201ENST00000602455 2715 ntBASIC6.95□□□□□ -1.3
RHBDL3P58872 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RHBDL3P58872 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.95□□□□□ -1.3
RHBDL3P58872 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RHBDL3P58872 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RHBDL3P58872 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
RHBDL3P58872 CR788268.1-201ENST00000603931 1809 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms