Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.4□□□□□ -1.54
VSX2P58304 AC009506.2-201ENST00000420635 840 ntBASIC5.4□□□□□ -1.54
VSX2P58304 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.4□□□□□ -1.54
VSX2P58304 TNPO1P1-201ENST00000423641 1138 ntBASIC5.4□□□□□ -1.54
VSX2P58304 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.4□□□□□ -1.54
VSX2P58304 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.4□□□□□ -1.54
VSX2P58304 AC073909.1-201ENST00000447112 999 ntBASIC5.4□□□□□ -1.54
VSX2P58304 UBE2V2P4-201ENST00000447495 259 ntBASIC5.4□□□□□ -1.54
VSX2P58304 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.4□□□□□ -1.54
VSX2P58304 AP000547.1-201ENST00000454360 617 ntBASIC5.4□□□□□ -1.54
VSX2P58304 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSX2P58304 RPS7P6-201ENST00000485777 579 ntBASIC5.4□□□□□ -1.54
VSX2P58304 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.4□□□□□ -1.54
VSX2P58304 RBM22P12-201ENST00000567098 1255 ntBASIC5.4□□□□□ -1.54
VSX2P58304 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.4□□□□□ -1.54
VSX2P58304 AC104695.2-201ENST00000605056 775 ntBASIC5.4□□□□□ -1.54
VSX2P58304 HIRAP1-201ENST00000605318 787 ntBASIC5.4□□□□□ -1.54
VSX2P58304 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.4□□□□□ -1.54
VSX2P58304 RNA5SP439-201ENST00000617595 124 ntBASIC5.4□□□□□ -1.54
VSX2P58304 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VSX2P58304 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VSX2P58304 XKRY2-202ENST00000623874 1581 ntBASIC5.4□□□□□ -1.55
VSX2P58304 XKRY-202ENST00000624960 1581 ntBASIC5.4□□□□□ -1.55
VSX2P58304 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.4□□□□□ -1.55
VSX2P58304 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.4□□□□□ -1.55
VSX2P58304 AL360270.2-201ENST00000562952 5985 ntBASIC5.4□□□□□ -1.55
VSX2P58304 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.4□□□□□ -1.55
VSX2P58304 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.4□□□□□ -1.55
VSX2P58304 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.4□□□□□ -1.55
VSX2P58304 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VSX2P58304 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VSX2P58304 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VSX2P58304 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.4□□□□□ -1.55
VSX2P58304 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.4□□□□□ -1.55
VSX2P58304 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.39□□□□□ -1.55
VSX2P58304 AP001284.1-201ENST00000528393 2118 ntBASIC5.39□□□□□ -1.55
VSX2P58304 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VSX2P58304 MIR133A2-201ENST00000347538 102 ntBASIC5.39□□□□□ -1.55
VSX2P58304 AC005522.1-201ENST00000395416 346 ntBASIC5.39□□□□□ -1.55
VSX2P58304 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 RN7SKP293-201ENST00000411389 296 ntBASIC5.39□□□□□ -1.55
VSX2P58304 AL596448.1-201ENST00000415024 392 ntBASIC5.39□□□□□ -1.55
VSX2P58304 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.39□□□□□ -1.55
VSX2P58304 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
VSX2P58304 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.39□□□□□ -1.55
VSX2P58304 DUTP7-201ENST00000507982 486 ntBASIC5.39□□□□□ -1.55
VSX2P58304 AC139697.1-201ENST00000548429 745 ntBASIC5.39□□□□□ -1.55
VSX2P58304 MRPS21P7-201ENST00000566937 238 ntBASIC5.39□□□□□ -1.55
VSX2P58304 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.39□□□□□ -1.55
VSX2P58304 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 NANOGP3-201ENST00000605855 286 ntBASIC5.39□□□□□ -1.55
VSX2P58304 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.39□□□□□ -1.55
VSX2P58304 AP000894.4-201ENST00000610185 483 ntBASIC5.39□□□□□ -1.55
VSX2P58304 CU639417.4-201ENST00000623928 207 ntBASIC5.39□□□□□ -1.55
VSX2P58304 AC007683.2-201ENST00000624681 714 ntBASIC5.39□□□□□ -1.55
VSX2P58304 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 AL049767.1-202ENST00000637826 242 ntBASIC5.39□□□□□ -1.55
VSX2P58304 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 MTND5P12-201ENST00000502851 1449 ntBASIC5.39□□□□□ -1.55
VSX2P58304 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VSX2P58304 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
VSX2P58304 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
VSX2P58304 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 AL132656.3-201ENST00000606384 1595 ntBASIC5.38□□□□□ -1.55
VSX2P58304 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VSX2P58304 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.38□□□□□ -1.55
VSX2P58304 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 AL354766.1-201ENST00000423396 542 ntBASIC5.38□□□□□ -1.55
VSX2P58304 AL133173.1-201ENST00000423458 397 ntBASIC5.38□□□□□ -1.55
VSX2P58304 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.38□□□□□ -1.55
VSX2P58304 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.38□□□□□ -1.55
VSX2P58304 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.38□□□□□ -1.55
VSX2P58304 LDHBP2-201ENST00000456969 1005 ntBASIC5.38□□□□□ -1.55
VSX2P58304 AL136038.1-201ENST00000497246 351 ntBASIC5.38□□□□□ -1.55
VSX2P58304 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.38□□□□□ -1.55
VSX2P58304 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.38□□□□□ -1.55
VSX2P58304 NPM1P21-201ENST00000513394 762 ntBASIC5.38□□□□□ -1.55
VSX2P58304 IGLV3-24-201ENST00000517477 197 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 1282.4 ms