Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 AL049779.2-201ENST00000553847 315 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AC106730.2-201ENST00000566641 540 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 PPATP2-201ENST00000605635 508 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AC005899.7-201ENST00000618199 588 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 AP001784.1-201ENST00000624107 428 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.46□□□□□ -1.54
CLDN6P56747 AP000550.3-201ENST00000637734 379 ntBASIC5.46□□□□□ -1.54
CLDN6P56747 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.46□□□□□ -1.54
CLDN6P56747 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.46□□□□□ -1.54
CLDN6P56747 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLDN6P56747 ZNF402P-201ENST00000404435 3100 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 AC131971.1-201ENST00000332881 1482 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN6P56747 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLDN6P56747 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 RNA5SP183-201ENST00000362452 119 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 RN7SKP103-201ENST00000363848 320 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 RNU1-59P-201ENST00000364829 162 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 NPM1P38-201ENST00000403835 865 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 RN7SKP151-201ENST00000410230 316 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 NIFKP3-201ENST00000417799 865 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 RBMY2KP-201ENST00000418221 992 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 NENFP1-201ENST00000419476 466 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AC005033.1-201ENST00000428904 813 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN6P56747 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 CBX1P2-201ENST00000453841 458 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AC004129.2-201ENST00000457229 287 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AL603882.1-201ENST00000463059 681 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN6P56747 BX284632.1-201ENST00000478218 541 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN6P56747 AC073610.1-201ENST00000489971 396 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN6P56747 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.45□□□□□ -1.54
CLDN6P56747 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN6P56747 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN6P56747 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN6P56747 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN6P56747 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.45□□□□□ -1.54
CLDN6P56747 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN6P56747 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 AC000068.2-201ENST00000608816 460 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AC126915.2-201ENST00000610957 190 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 MIR6820-201ENST00000611508 62 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 U1.25-201ENST00000614085 162 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AL118522.2-201ENST00000616045 615 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 U1.34-201ENST00000618578 162 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 U1.31-201ENST00000620022 160 ntBASIC5.45□□□□□ -1.54
CLDN6P56747 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.45□□□□□ -1.54
CLDN6P56747 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLDN6P56747 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLDN6P56747 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLDN6P56747 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CLDN6P56747 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN6P56747 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CLDN6P56747 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN6P56747 MTHFD2P5-201ENST00000320415 844 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 RNA5SP30-201ENST00000365552 115 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 AL589647.1-201ENST00000402485 466 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLDN6P56747 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.44□□□□□ -1.54
CLDN6P56747 AC006335.2-201ENST00000437993 330 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 AL772161.1-201ENST00000439130 476 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.44□□□□□ -1.54
CLDN6P56747 RPS21P4-201ENST00000487122 248 ntBASIC5.44□□□□□ -1.54
CLDN6P56747 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms