Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH4P55283 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH4P55283 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH4P55283 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH4P55283 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH4P55283 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH4P55283 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDH4P55283 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDH4P55283 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH4P55283 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH4P55283 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDH4P55283 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDH4P55283 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH4P55283 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 OR10T1P-201ENST00000424327 947 ntBASIC5.74□□□□□ -1.49
CDH4P55283 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH4P55283 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH4P55283 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.74□□□□□ -1.49
CDH4P55283 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH4P55283 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH4P55283 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.74□□□□□ -1.49
CDH4P55283 AC012616.1-201ENST00000600294 197 ntBASIC5.74□□□□□ -1.49
CDH4P55283 AL355480.1-201ENST00000629041 99 ntBASIC5.74□□□□□ -1.49
CDH4P55283 AL049767.1-202ENST00000637826 242 ntBASIC5.74□□□□□ -1.49
CDH4P55283 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.74□□□□□ -1.49
CDH4P55283 MT-RNR2-201ENST00000387347 1559 ntBASIC5.74□□□□□ -1.49
CDH4P55283 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH4P55283 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH4P55283 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
CDH4P55283 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CDH4P55283 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.74□□□□□ -1.49
CDH4P55283 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CDH4P55283 OR4F13P-202ENST00000560066 2054 ntBASIC5.73□□□□□ -1.49
CDH4P55283 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 HSPD1P7-201ENST00000447985 1686 ntBASIC5.73□□□□□ -1.49
CDH4P55283 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CDH4P55283 RNA5SP326-201ENST00000363209 110 ntBASIC5.73□□□□□ -1.49
CDH4P55283 RN7SKP28-201ENST00000364770 305 ntBASIC5.73□□□□□ -1.49
CDH4P55283 RN7SKP6-201ENST00000364795 319 ntBASIC5.73□□□□□ -1.49
CDH4P55283 NACAP7-201ENST00000407371 609 ntBASIC5.73□□□□□ -1.49
CDH4P55283 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH4P55283 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 AL390119.1-201ENST00000440329 312 ntBASIC5.73□□□□□ -1.49
CDH4P55283 AC019185.1-201ENST00000442718 389 ntBASIC5.73□□□□□ -1.49
CDH4P55283 CYCSP51-201ENST00000443545 318 ntBASIC5.73□□□□□ -1.49
CDH4P55283 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.73□□□□□ -1.49
CDH4P55283 SNORD125-201ENST00000459538 96 ntBASIC5.73□□□□□ -1.49
CDH4P55283 GAPDHP62-201ENST00000515313 990 ntBASIC5.73□□□□□ -1.49
CDH4P55283 RN7SKP253-201ENST00000516424 309 ntBASIC5.73□□□□□ -1.49
CDH4P55283 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH4P55283 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.73□□□□□ -1.49
CDH4P55283 AC132068.1-201ENST00000623805 459 ntBASIC5.73□□□□□ -1.49
CDH4P55283 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.73□□□□□ -1.49
CDH4P55283 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CDH4P55283 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
CDH4P55283 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CDH4P55283 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDH4P55283 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CDH4P55283 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.73□□□□□ -1.49
CDH4P55283 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
CDH4P55283 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDH4P55283 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH4P55283 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDH4P55283 RNA5SP132-201ENST00000364725 118 ntBASIC5.72□□□□□ -1.49
CDH4P55283 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDH4P55283 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH4P55283 OR6D1P-201ENST00000436165 939 ntBASIC5.72□□□□□ -1.49
CDH4P55283 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.72□□□□□ -1.49
CDH4P55283 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDH4P55283 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.72□□□□□ -1.49
CDH4P55283 snoU13.29-201ENST00000459370 104 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms