Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-207P-201ENST00000384137 107 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
EPHB3P54753 NPM1P36-201ENST00000415681 835 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 AC112492.2-201ENST00000432774 1030 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.73□□□□□ -1.33
EPHB3P54753 MTND2P21-201ENST00000436242 1042 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 ISCA1P2-201ENST00000438679 421 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 UBE2D3P4-201ENST00000441973 436 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 HMGN1P2-201ENST00000445197 310 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AL358876.1-201ENST00000453364 1075 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.73□□□□□ -1.33
EPHB3P54753 NDUFA5P5-201ENST00000468361 342 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 RN7SL369P-201ENST00000477138 299 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 RPL12P31-201ENST00000478433 450 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.73□□□□□ -1.33
EPHB3P54753 RN7SL714P-201ENST00000487050 298 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC091965.3-201ENST00000506236 208 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.73□□□□□ -1.33
EPHB3P54753 IGLV3-6-201ENST00000523937 250 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC005726.4-201ENST00000582858 458 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC092794.1-201ENST00000612734 582 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC015804.1-201ENST00000622935 435 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.73□□□□□ -1.33
EPHB3P54753 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
EPHB3P54753 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
EPHB3P54753 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 CTAGE11P-201ENST00000451540 2353 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
EPHB3P54753 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC104162.1-201ENST00000430831 2382 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 AC073342.2-201ENST00000595842 1800 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 RNU6-517P-201ENST00000384362 110 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 RNU6-636P-201ENST00000384598 107 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 TRAV35-201ENST00000390462 330 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 RNU6-1242P-201ENST00000391052 103 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.72□□□□□ -1.33
EPHB3P54753 MTCO3P41-201ENST00000414801 328 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AL365203.2-201ENST00000423444 196 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 NPM1P25-201ENST00000429734 854 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 MTCO2P16-201ENST00000436962 677 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.72□□□□□ -1.33
EPHB3P54753 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC144530.1-201ENST00000452862 555 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.72□□□□□ -1.33
EPHB3P54753 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC095052.1-201ENST00000509955 863 ntBASIC6.72□□□□□ -1.33
EPHB3P54753 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.72□□□□□ -1.33
EPHB3P54753 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
EPHB3P54753 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.72□□□□□ -1.33
EPHB3P54753 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.72□□□□□ -1.33
EPHB3P54753 RN7SL475P-201ENST00000583379 298 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms