Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF2A1P52655 AC011840.5-201ENST00000582125 771 ntBASIC5.38□□□□□ -1.55
GTF2A1P52655 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.38□□□□□ -1.55
GTF2A1P52655 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF2A1P52655 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF2A1P52655 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.38□□□□□ -1.55
GTF2A1P52655 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF2A1P52655 RNF138P2-201ENST00000603490 592 ntBASIC5.38□□□□□ -1.55
GTF2A1P52655 AL353807.4-201ENST00000604995 257 ntBASIC5.38□□□□□ -1.55
GTF2A1P52655 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF2A1P52655 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.38□□□□□ -1.55
GTF2A1P52655 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.38□□□□□ -1.55
GTF2A1P52655 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
GTF2A1P52655 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GTF2A1P52655 MIR6503-201ENST00000622884 86 ntBASIC5.38□□□□□ -1.55
GTF2A1P52655 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
GTF2A1P52655 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GTF2A1P52655 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.38□□□□□ -1.55
GTF2A1P52655 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF2A1P52655 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.38□□□□□ -1.55
GTF2A1P52655 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GTF2A1P52655 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GTF2A1P52655 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
GTF2A1P52655 MFSD8-239ENST00000641590 2479 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AC009220.2-201ENST00000489759 1751 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GTF2A1P52655 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
GTF2A1P52655 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GTF2A1P52655 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GTF2A1P52655 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GTF2A1P52655 AC026310.1-201ENST00000396004 378 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AL161742.1-201ENST00000418154 584 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 VN1R21P-201ENST00000426703 765 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GTF2A1P52655 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF2A1P52655 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF2A1P52655 PPIAP10-201ENST00000438675 458 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 MTND6P18-201ENST00000439477 513 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.37□□□□□ -1.55
GTF2A1P52655 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 FGF7P3-201ENST00000454645 303 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF2A1P52655 CYCSP34-201ENST00000458172 304 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.37□□□□□ -1.55
GTF2A1P52655 AP002884.1-201ENST00000479691 655 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 NANOGP3-201ENST00000605855 286 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AC141002.1-201ENST00000607025 279 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AL008582.1-201ENST00000609612 442 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 uc_338.26-201ENST00000612659 160 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 MIR6849-201ENST00000618543 69 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AC117503.3-201ENST00000623811 601 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.37□□□□□ -1.55
GTF2A1P52655 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GTF2A1P52655 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF2A1P52655 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
GTF2A1P52655 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
GTF2A1P52655 AC093775.1-201ENST00000624154 1868 ntBASIC5.37□□□□□ -1.55
GTF2A1P52655 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
GTF2A1P52655 RN7SKP78-201ENST00000364711 318 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.36□□□□□ -1.55
GTF2A1P52655 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF2A1P52655 RN7SKP117-201ENST00000410175 264 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 DHFRP2-201ENST00000414224 547 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.36□□□□□ -1.55
GTF2A1P52655 GTF3AP6-201ENST00000432585 986 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AC016772.1-201ENST00000444170 1261 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AL356133.1-201ENST00000444762 372 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.36□□□□□ -1.55
GTF2A1P52655 RN7SL655P-201ENST00000486087 298 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.36□□□□□ -1.55
GTF2A1P52655 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF2A1P52655 PSMC1P8-201ENST00000536820 1296 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AC008055.1-201ENST00000547032 609 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AC023080.1-201ENST00000551663 931 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 MIR378H-201ENST00000579966 83 ntBASIC5.36□□□□□ -1.55
GTF2A1P52655 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.36□□□□□ -1.55
GTF2A1P52655 RPL26P30-202ENST00000602923 645 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms