Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.62□□□□□ -0.87
SMARCA2P51531 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA2P51531 AC234781.3-201ENST00000452540 973 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 AC104634.1-201ENST00000452720 462 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC9.62□□□□□ -0.87
SMARCA2P51531 OR7H2P-201ENST00000513483 306 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.62□□□□□ -0.87
SMARCA2P51531 YWHABP2-201ENST00000540201 713 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 AL031320.1-201ENST00000604177 357 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 EIF3FP1-201ENST00000613970 806 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SMARCA2P51531 AC123769.2-201ENST00000624332 5984 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 AC007996.1-201ENST00000620414 2821 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA2P51531 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 NXF4-202ENST00000416098 1465 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SMARCA2P51531 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
SMARCA2P51531 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SMARCA2P51531 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SMARCA2P51531 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
SMARCA2P51531 AL121886.1-201ENST00000358609 435 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 U3.3-201ENST00000362986 216 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 UBE2FP2-201ENST00000566646 462 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 AP005403.1-201ENST00000579720 229 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 AL392048.1-201ENST00000613946 534 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 AL450226.2-201ENST00000622913 439 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 AC015660.5-201ENST00000623238 564 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SMARCA2P51531 AC016717.3-201ENST00000624730 554 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 WBP11P1-201ENST00000562560 1931 ntBASIC9.61□□□□□ -0.87
SMARCA2P51531 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.61□□□□□ -0.87
SMARCA2P51531 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMARCA2P51531 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SMARCA2P51531 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA2P51531 AC079741.1-201ENST00000321498 212 ntBASIC9.6□□□□□ -0.87
SMARCA2P51531 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA2P51531 NUDT19P3-201ENST00000404698 555 ntBASIC9.6□□□□□ -0.87
SMARCA2P51531 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SMARCA2P51531 AC007064.3-201ENST00000422608 359 ntBASIC9.6□□□□□ -0.87
SMARCA2P51531 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.6□□□□□ -0.87
SMARCA2P51531 USP24P1-201ENST00000433802 779 ntBASIC9.6□□□□□ -0.87
SMARCA2P51531 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.6□□□□□ -0.87
SMARCA2P51531 KNOP1P3-201ENST00000446933 426 ntBASIC9.6□□□□□ -0.87
SMARCA2P51531 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.6□□□□□ -0.87
SMARCA2P51531 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.6□□□□□ -0.87
SMARCA2P51531 DERA-209ENST00000532964 854 ntTSL 5 BASIC9.6□□□□□ -0.87
SMARCA2P51531 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC9.6□□□□□ -0.87
SMARCA2P51531 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC9.6□□□□□ -0.87
SMARCA2P51531 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SMARCA2P51531 AC092747.4-201ENST00000620519 1861 ntBASIC9.6□□□□□ -0.87
SMARCA2P51531 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA2P51531 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SMARCA2P51531 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC9.6□□□□□ -0.87
SMARCA2P51531 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SMARCA2P51531 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC9.59□□□□□ -0.87
SMARCA2P51531 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SMARCA2P51531 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SMARCA2P51531 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SMARCA2P51531 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC9.59□□□□□ -0.87
SMARCA2P51531 RN7SL354P-201ENST00000469282 294 ntBASIC9.59□□□□□ -0.87
SMARCA2P51531 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SMARCA2P51531 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC9.59□□□□□ -0.87
SMARCA2P51531 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SMARCA2P51531 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA2P51531 AC006600.2-201ENST00000624834 2506 ntBASIC9.59□□□□□ -0.87
SMARCA2P51531 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SMARCA2P51531 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA2P51531 CYP4F29P-201ENST00000420685 446 ntBASIC9.58□□□□□ -0.88
SMARCA2P51531 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC9.58□□□□□ -0.88
SMARCA2P51531 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC9.58□□□□□ -0.88
SMARCA2P51531 RPL12P39-201ENST00000455456 496 ntBASIC9.58□□□□□ -0.88
SMARCA2P51531 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.58□□□□□ -0.88
SMARCA2P51531 AC008033.2-201ENST00000542626 177 ntBASIC9.58□□□□□ -0.88
SMARCA2P51531 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA2P51531 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA2P51531 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.58□□□□□ -0.88
SMARCA2P51531 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA2P51531 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA2P51531 AC012414.7-202ENST00000622705 1090 ntBASIC9.58□□□□□ -0.88
SMARCA2P51531 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
SMARCA2P51531 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
SMARCA2P51531 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA2P51531 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms