Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 AC108103.1-201ENST00000511286 446 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 Y_RNA.710-201ENST00000516975 110 ntBASIC5.35□□□□□ -1.55
SOX2P48431 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 AC130366.1-201ENST00000526505 1192 ntBASIC5.35□□□□□ -1.55
SOX2P48431 OR9G2P-201ENST00000533326 880 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AP001804.2-201ENST00000533932 910 ntBASIC5.35□□□□□ -1.55
SOX2P48431 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC091304.5-201ENST00000568969 158 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC125494.2-201ENST00000602431 657 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AL160237.3-201ENST00000604114 1013 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AL450336.1-201ENST00000605180 586 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC012511.1-201ENST00000608140 449 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AL136097.3-201ENST00000611097 505 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC022106.1-201ENST00000612834 766 ntBASIC5.35□□□□□ -1.55
SOX2P48431 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 AC000095.2-202ENST00000637415 154 ntBASIC5.35□□□□□ -1.55
SOX2P48431 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX2P48431 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SOX2P48431 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX2P48431 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX2P48431 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 HSPD1P11-201ENST00000508643 1702 ntBASIC5.34□□□□□ -1.55
SOX2P48431 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SOX2P48431 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 AC010894.1-201ENST00000313760 361 ntBASIC5.34□□□□□ -1.55
SOX2P48431 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX2P48431 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX2P48431 AC026310.1-201ENST00000396004 378 ntBASIC5.34□□□□□ -1.55
SOX2P48431 SNORA77.2-201ENST00000408571 112 ntBASIC5.34□□□□□ -1.55
SOX2P48431 RN7SKP121-201ENST00000410842 305 ntBASIC5.34□□□□□ -1.55
SOX2P48431 NANOGP5-201ENST00000424456 877 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AC093422.3-201ENST00000428506 305 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX2P48431 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX2P48431 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX2P48431 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX2P48431 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.34□□□□□ -1.55
SOX2P48431 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 RN7SL655P-201ENST00000486087 298 ntBASIC5.34□□□□□ -1.55
SOX2P48431 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX2P48431 AP001207.2-201ENST00000519490 539 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX2P48431 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX2P48431 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX2P48431 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 CYB5AP5-201ENST00000549779 389 ntBASIC5.34□□□□□ -1.55
SOX2P48431 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SOX2P48431 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 MIR378H-201ENST00000579966 83 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.34□□□□□ -1.55
SOX2P48431 SUMO2P14-201ENST00000604488 293 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AC067838.1-201ENST00000606064 577 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AL589743.6-201ENST00000611025 117 ntBASIC5.34□□□□□ -1.55
SOX2P48431 VN1R9P-201ENST00000614184 867 ntBASIC5.34□□□□□ -1.55
SOX2P48431 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.34□□□□□ -1.55
SOX2P48431 MIR6849-201ENST00000618543 69 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AC092159.4-201ENST00000624944 550 ntBASIC5.34□□□□□ -1.55
SOX2P48431 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX2P48431 CASC19-274ENST00000642018 970 ntBASIC5.34□□□□□ -1.55
SOX2P48431 AC092070.2-203ENST00000598377 3644 ntBASIC5.34□□□□□ -1.55
SOX2P48431 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms