Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC133552.1-201ENST00000569988 4007 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NKX2-1P43699 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.83□□□□□ -1.64
NKX2-1P43699 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NKX2-1P43699 UGT2B26P-201ENST00000508672 1613 ntBASIC4.83□□□□□ -1.64
NKX2-1P43699 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC007382.1-201ENST00000624376 2618 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 RN7SKP69-201ENST00000365390 305 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 RNU6-609P-201ENST00000365459 107 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 U3.23-201ENST00000391132 200 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 HMGB3P7-201ENST00000400214 611 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 MIR1266-201ENST00000408125 84 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 SNORA79B-201ENST00000410557 148 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 DHFRP2-201ENST00000414224 547 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 RPA2P2-201ENST00000419698 796 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 HSFY1P1-201ENST00000423928 1178 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 UBE2V1P6-201ENST00000430840 422 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC093716.1-201ENST00000435923 377 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC096775.1-201ENST00000437724 448 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 OR3D1P-201ENST00000438288 955 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 PA2G4P6-201ENST00000438325 1197 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC015983.1-201ENST00000441577 373 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AL445991.1-201ENST00000450381 475 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 HIGD1AP16-201ENST00000450986 258 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 RPL5P13-201ENST00000462840 709 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 RN7SL83P-201ENST00000468131 297 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AP003385.3-201ENST00000472498 287 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 RPS4XP17-201ENST00000479057 754 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC114324.2-202ENST00000503812 134 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 IGHV3-63-201ENST00000518422 341 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC131935.1-201ENST00000524621 333 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC109635.6-201ENST00000525487 1113 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC135178.6-201ENST00000605314 398 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC034236.3-201ENST00000605999 461 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC026790.2-201ENST00000606282 430 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AL645927.2-201ENST00000618350 349 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.82□□□□□ -1.64
NKX2-1P43699 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC106858.1-201ENST00000637497 429 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NKX2-1P43699 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.82□□□□□ -1.64
NKX2-1P43699 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NKX2-1P43699 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AP001002.1-201ENST00000625148 1513 ntBASIC4.82□□□□□ -1.64
NKX2-1P43699 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.81□□□□□ -1.64
NKX2-1P43699 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms