Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 SNORA18.6-201ENST00000516792 115 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 HMGB1P41-201ENST00000520234 440 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC090424.1-201ENST00000535243 736 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 OR6C73P-201ENST00000546432 358 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AC008147.3-201ENST00000548666 354 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.78□□□□□ -1.32
COL8A1P27658 AL135978.1-201ENST00000553618 1266 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 MT1L-202ENST00000566367 78 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 MRPS5P4-201ENST00000592830 325 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 AL121782.1-201ENST00000611242 413 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 uc_338.5-201ENST00000611839 155 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AC108479.2-201ENST00000617314 601 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
COL8A1P27658 AP000648.2-201ENST00000624182 404 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AC068880.5-201ENST00000624331 290 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 AC100871.1-201ENST00000507871 1456 ntBASIC6.78□□□□□ -1.32
COL8A1P27658 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL8A1P27658 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL8A1P27658 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL8A1P27658 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC6.78□□□□□ -1.32
COL8A1P27658 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL8A1P27658 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL8A1P27658 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL8A1P27658 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.32
COL8A1P27658 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL8A1P27658 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.32
COL8A1P27658 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.77□□□□□ -1.32
COL8A1P27658 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.77□□□□□ -1.33
COL8A1P27658 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 RNU5F-6P-201ENST00000362979 116 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL8A1P27658 AL080285.1-201ENST00000404225 984 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 MIR548I3-201ENST00000408378 149 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 MIR548I1-201ENST00000408810 149 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 GAPDHP73-201ENST00000423411 1007 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 AL157884.1-201ENST00000424561 454 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 OR2B7P-201ENST00000429302 934 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 RPS25P9-201ENST00000435591 252 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC005517.1-201ENST00000452091 489 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.77□□□□□ -1.33
COL8A1P27658 U8.20-201ENST00000459445 131 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 RPL38P1-201ENST00000460914 211 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 RPL7P48-201ENST00000461513 746 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC090013.1-201ENST00000485147 480 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 RN7SL635P-201ENST00000492123 296 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC139783.2-201ENST00000504847 1145 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.77□□□□□ -1.33
COL8A1P27658 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.77□□□□□ -1.33
COL8A1P27658 AP005902.1-201ENST00000521358 186 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC239860.2-201ENST00000525886 270 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC023310.2-201ENST00000553844 547 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 OR4N1P-201ENST00000554847 949 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC044913.1-201ENST00000557200 430 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC138749.2-201ENST00000566048 167 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.77□□□□□ -1.33
COL8A1P27658 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms