Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 PWAR1-201ENST00000624188 2414 ntBASIC4.59□□□□□ -1.67
CXCL3P19876 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.59□□□□□ -1.67
CXCL3P19876 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CXCL3P19876 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.59□□□□□ -1.68
CXCL3P19876 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
CXCL3P19876 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CXCL3P19876 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
CXCL3P19876 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CXCL3P19876 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CXCL3P19876 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL3P19876 AC007342.5-201ENST00000571340 2142 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL3P19876 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 GAPDHP24-201ENST00000328713 983 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 RNA5SP77-201ENST00000365394 120 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 AC013442.1-201ENST00000397347 228 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AC007738.1-201ENST00000413892 348 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL3P19876 OR6C64P-201ENST00000419708 825 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 KIF4CP-201ENST00000422742 1279 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL3P19876 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL3P19876 AL022324.2-201ENST00000434827 780 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AL645936.1-201ENST00000441979 518 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 TRIM60P16-201ENST00000444048 694 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL3P19876 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL3P19876 AC002553.3-201ENST00000453002 341 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 RN7SL269P-201ENST00000467795 305 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 RN7SL591P-201ENST00000496150 292 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL3P19876 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.58□□□□□ -1.68
CXCL3P19876 AC138938.1-201ENST00000515431 782 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.58□□□□□ -1.68
CXCL3P19876 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 LINC00556-201ENST00000569603 412 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 RFPL4AP6-201ENST00000616792 846 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 AP000648.2-201ENST00000624182 404 ntBASIC4.58□□□□□ -1.68
CXCL3P19876 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.58□□□□□ -1.68
CXCL3P19876 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.58□□□□□ -1.68
CXCL3P19876 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CXCL3P19876 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CXCL3P19876 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
CXCL3P19876 AC012254.3-201ENST00000591183 2117 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL3P19876 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CXCL3P19876 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CXCL3P19876 SNORA64.3-201ENST00000365647 134 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CXCL3P19876 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.57□□□□□ -1.68
CXCL3P19876 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 AL590004.3-202ENST00000445883 451 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL3P19876 AL445466.1-201ENST00000448432 357 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 RBMY2HP-201ENST00000457961 720 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL3P19876 AC117500.1-201ENST00000497352 755 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 GAPDHP71-201ENST00000511530 1003 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 SNORA74.1-201ENST00000516320 180 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL3P19876 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 OR11H3P-201ENST00000554547 982 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.57□□□□□ -1.68
CXCL3P19876 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL3P19876 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.57□□□□□ -1.68
CXCL3P19876 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.57□□□□□ -1.68
CXCL3P19876 MIR6885-201ENST00000612241 66 ntBASIC4.57□□□□□ -1.68
CXCL3P19876 MIR6839-201ENST00000620425 113 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms