Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC083923.1-201ENST00000523708 376 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 KCTD9P4-201ENST00000526766 1166 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC7.73□□□□□ -1.17
ERCC3P19447 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC026956.1-201ENST00000558741 396 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 SNORD96A-201ENST00000606577 79 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AP003392.5-201ENST00000607857 415 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AL139407.1-201ENST00000613826 1175 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 MIR6721-201ENST00000617181 87 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AP000676.3-201ENST00000623299 569 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 MIR1910-201ENST00000636955 80 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 YES1P1-201ENST00000418510 1628 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 CCT8P1-201ENST00000413611 1657 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
ERCC3P19447 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
ERCC3P19447 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
ERCC3P19447 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 SNORA70.3-201ENST00000365075 132 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 SNORD116.1-201ENST00000365628 92 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 MIR640-201ENST00000385086 96 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
ERCC3P19447 RPL9P21-201ENST00000392269 505 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 PSMA6P1-201ENST00000400275 741 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.72□□□□□ -1.17
ERCC3P19447 PTCD2P2-201ENST00000415579 1095 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 RPF2P1-201ENST00000424137 906 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AL590399.4-201ENST00000436561 601 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AL161722.1-201ENST00000446972 1032 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AL390728.3-201ENST00000452704 270 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 PSAT1P4-201ENST00000466500 526 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 PRDX3P4-201ENST00000470828 747 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AC021006.1-201ENST00000489849 553 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC113367.2-201ENST00000505749 160 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC112225.1-201ENST00000508230 297 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC008083.2-201ENST00000546707 476 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 ULK4P1-202ENST00000565174 503 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 MTCO1P40-201ENST00000574371 625 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.72□□□□□ -1.17
ERCC3P19447 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AL022161.1-201ENST00000604390 213 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 DPRXP5-201ENST00000604662 539 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AC111186.1-201ENST00000604684 130 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 MIR7854-201ENST00000620068 65 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
ERCC3P19447 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.72□□□□□ -1.17
ERCC3P19447 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ERCC3P19447 AC104446.1-201ENST00000613728 1321 ntBASIC7.72□□□□□ -1.17
ERCC3P19447 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms