Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.8□□□□□ -1.16
ATF3P18847 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ATF3P18847 AL589826.1-201ENST00000340697 249 ntBASIC7.8□□□□□ -1.16
ATF3P18847 RNU6-819P-201ENST00000364116 107 ntBASIC7.8□□□□□ -1.16
ATF3P18847 MIR551A-201ENST00000385042 96 ntBASIC7.8□□□□□ -1.16
ATF3P18847 AC013442.1-201ENST00000397347 228 ntBASIC7.8□□□□□ -1.16
ATF3P18847 AL356967.1-201ENST00000406305 431 ntBASIC7.8□□□□□ -1.16
ATF3P18847 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 DSTNP5-201ENST00000427921 523 ntBASIC7.8□□□□□ -1.16
ATF3P18847 Z85994.2-201ENST00000434327 452 ntBASIC7.8□□□□□ -1.16
ATF3P18847 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 DNAJA1P6-201ENST00000437347 354 ntBASIC7.8□□□□□ -1.16
ATF3P18847 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.8□□□□□ -1.16
ATF3P18847 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.8□□□□□ -1.16
ATF3P18847 MTND3P4-201ENST00000453537 303 ntBASIC7.8□□□□□ -1.16
ATF3P18847 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.8□□□□□ -1.16
ATF3P18847 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.8□□□□□ -1.16
ATF3P18847 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.8□□□□□ -1.16
ATF3P18847 RN7SKP288-201ENST00000516227 268 ntBASIC7.8□□□□□ -1.16
ATF3P18847 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.8□□□□□ -1.16
ATF3P18847 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.8□□□□□ -1.16
ATF3P18847 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.8□□□□□ -1.16
ATF3P18847 SNORD91A-202ENST00000609620 191 ntBASIC7.8□□□□□ -1.16
ATF3P18847 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.8□□□□□ -1.16
ATF3P18847 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 AC009166.2-201ENST00000624410 2833 ntBASIC7.8□□□□□ -1.16
ATF3P18847 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ATF3P18847 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
ATF3P18847 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.8□□□□□ -1.16
ATF3P18847 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
ATF3P18847 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
ATF3P18847 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
ATF3P18847 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
ATF3P18847 CDY11P-201ENST00000447168 1651 ntBASIC7.79□□□□□ -1.16
ATF3P18847 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.79□□□□□ -1.16
ATF3P18847 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
ATF3P18847 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.79□□□□□ -1.16
ATF3P18847 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.79□□□□□ -1.16
ATF3P18847 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 AL162739.1-201ENST00000450606 307 ntBASIC7.79□□□□□ -1.16
ATF3P18847 RPS3AP53-201ENST00000454716 778 ntBASIC7.79□□□□□ -1.16
ATF3P18847 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 KCTD9P6-201ENST00000522306 950 ntBASIC7.79□□□□□ -1.16
ATF3P18847 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.79□□□□□ -1.16
ATF3P18847 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.79□□□□□ -1.16
ATF3P18847 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
ATF3P18847 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.79□□□□□ -1.16
ATF3P18847 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.79□□□□□ -1.16
ATF3P18847 AC027334.1-201ENST00000603257 310 ntBASIC7.79□□□□□ -1.16
ATF3P18847 AC013731.1-201ENST00000604340 883 ntBASIC7.79□□□□□ -1.16
ATF3P18847 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 TCL6_3.1-201ENST00000619064 137 ntBASIC7.79□□□□□ -1.16
ATF3P18847 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.79□□□□□ -1.16
ATF3P18847 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
ATF3P18847 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 AC119674.1-213ENST00000641177 1386 ntBASIC7.79□□□□□ -1.16
ATF3P18847 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ATF3P18847 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.79□□□□□ -1.16
ATF3P18847 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
ATF3P18847 AL929601.4-201ENST00000613011 1341 ntBASIC7.78□□□□□ -1.16
ATF3P18847 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ATF3P18847 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.78□□□□□ -1.16
ATF3P18847 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.78□□□□□ -1.16
ATF3P18847 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
ATF3P18847 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
ATF3P18847 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ATF3P18847 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
ATF3P18847 MIR133B-201ENST00000362210 119 ntBASIC7.78□□□□□ -1.16
ATF3P18847 MIR640-201ENST00000385086 96 ntBASIC7.78□□□□□ -1.16
ATF3P18847 CHMP1B2P-201ENST00000399581 597 ntBASIC7.78□□□□□ -1.16
ATF3P18847 RN7SKP151-201ENST00000410230 316 ntBASIC7.78□□□□□ -1.16
ATF3P18847 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.78□□□□□ -1.16
ATF3P18847 RPL12P43-201ENST00000420608 499 ntBASIC7.78□□□□□ -1.16
ATF3P18847 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.78□□□□□ -1.16
ATF3P18847 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms