Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC010632.3-201ENST00000611377 369 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AL691477.1-201ENST00000624398 162 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC073869.8-201ENST00000641806 335 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 ABCC13-202ENST00000463099 3842 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RNA5SP242-201ENST00000364171 118 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RN7SKP124-201ENST00000364730 341 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 Z93019.1-201ENST00000416450 973 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC009784.1-201ENST00000426484 460 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AL035090.1-201ENST00000454835 332 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC002075.1-201ENST00000457396 676 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC023141.9-201ENST00000458734 412 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RPL35AP19-201ENST00000469425 329 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RN7SL717P-201ENST00000478343 297 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RPL7P51-201ENST00000490532 749 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RN7SL466P-201ENST00000497546 295 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC109464.1-201ENST00000511091 819 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RN7SKP99-201ENST00000517028 307 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 IGKV3D-34-201ENST00000522638 302 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC078878.1-201ENST00000539832 958 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC015720.2-201ENST00000567709 334 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 SNORD95-201ENST00000579879 68 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC004477.3-201ENST00000614061 590 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC003973.3-201ENST00000624863 2822 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB2P05538 AC004656.1-201ENST00000568479 4951 ntBASIC5.54□□□□□ -1.52
HLA-DQB2P05538 CASC19-260ENST00000641828 2001 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 BRAFP1-201ENST00000445336 2703 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC140134.1-201ENST00000511830 3544 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 RN7SKP69-201ENST00000365390 305 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AL391422.1-201ENST00000402155 436 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 SNORA11.3-201ENST00000408471 128 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 TAAR4P-201ENST00000454843 1039 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC090638.1-201ENST00000498296 909 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC104109.1-201ENST00000498563 436 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 SCARNA20.4-201ENST00000516969 131 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 OR4A43P-201ENST00000532938 908 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC108738.1-201ENST00000603703 237 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AC000068.2-201ENST00000608816 460 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 AL031658.2-201ENST00000616850 651 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 SNORA11.6-201ENST00000619030 128 ntBASIC5.53□□□□□ -1.52
HLA-DQB2P05538 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB2P05538 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms