Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.71□□□□□ -1.65
CD74P04233 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CD74P04233 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CD74P04233 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.71□□□□□ -1.66
CD74P04233 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 AC104260.2-201ENST00000623551 3497 ntBASIC4.71□□□□□ -1.66
CD74P04233 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 TRIM51GP-201ENST00000534741 1350 ntBASIC4.71□□□□□ -1.66
CD74P04233 AC107977.1-201ENST00000355745 939 ntBASIC4.71□□□□□ -1.66
CD74P04233 RN7SKP250-201ENST00000363924 321 ntBASIC4.71□□□□□ -1.66
CD74P04233 RNU1-146P-201ENST00000364015 165 ntBASIC4.71□□□□□ -1.66
CD74P04233 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 OR1L6-202ENST00000373684 1044 ntBASIC4.71□□□□□ -1.66
CD74P04233 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 AC211486.3-201ENST00000412694 621 ntBASIC4.71□□□□□ -1.66
CD74P04233 AL357752.1-201ENST00000412817 349 ntBASIC4.71□□□□□ -1.66
CD74P04233 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC234781.4-201ENST00000419384 244 ntBASIC4.71□□□□□ -1.66
CD74P04233 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.71□□□□□ -1.66
CD74P04233 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 AC023141.3-201ENST00000436698 278 ntBASIC4.71□□□□□ -1.66
CD74P04233 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.71□□□□□ -1.66
CD74P04233 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CD74P04233 AC019084.1-201ENST00000457337 432 ntBASIC4.71□□□□□ -1.66
CD74P04233 RN7SL570P-201ENST00000484405 292 ntBASIC4.71□□□□□ -1.66
CD74P04233 AC073610.1-201ENST00000489971 396 ntBASIC4.71□□□□□ -1.66
CD74P04233 IMPA1P1-201ENST00000510718 842 ntBASIC4.71□□□□□ -1.66
CD74P04233 EIF3KP3-201ENST00000514461 639 ntBASIC4.71□□□□□ -1.66
CD74P04233 AP001000.1-201ENST00000526843 742 ntBASIC4.71□□□□□ -1.66
CD74P04233 TRIM51DP-201ENST00000529746 596 ntBASIC4.71□□□□□ -1.66
CD74P04233 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 PRPF19P1-201ENST00000584766 898 ntBASIC4.71□□□□□ -1.66
CD74P04233 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.71□□□□□ -1.66
CD74P04233 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC006272.2-201ENST00000594725 163 ntBASIC4.71□□□□□ -1.66
CD74P04233 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.71□□□□□ -1.66
CD74P04233 AC108738.1-201ENST00000603703 237 ntBASIC4.71□□□□□ -1.66
CD74P04233 AL139041.1-201ENST00000605480 610 ntBASIC4.71□□□□□ -1.66
CD74P04233 AC073575.2-201ENST00000614212 627 ntBASIC4.71□□□□□ -1.66
CD74P04233 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.71□□□□□ -1.66
CD74P04233 MIR6823-201ENST00000622118 61 ntBASIC4.71□□□□□ -1.66
CD74P04233 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.71□□□□□ -1.66
CD74P04233 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CD74P04233 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CD74P04233 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CD74P04233 MTCO1P15-201ENST00000529569 1526 ntBASIC4.71□□□□□ -1.66
CD74P04233 SMG1P7-201ENST00000565246 2704 ntBASIC4.71□□□□□ -1.66
CD74P04233 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CD74P04233 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 AF287957.1-201ENST00000607368 1595 ntBASIC4.7□□□□□ -1.66
CD74P04233 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CD74P04233 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.7□□□□□ -1.66
CD74P04233 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CD74P04233 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CD74P04233 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.7□□□□□ -1.66
CD74P04233 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.7□□□□□ -1.66
CD74P04233 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 RN7SKP187-201ENST00000365536 330 ntBASIC4.7□□□□□ -1.66
CD74P04233 AC007618.1-201ENST00000366455 732 ntBASIC4.7□□□□□ -1.66
CD74P04233 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 SNORD56.6-201ENST00000384569 71 ntBASIC4.7□□□□□ -1.66
CD74P04233 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.7□□□□□ -1.66
CD74P04233 AL096711.1-201ENST00000404780 554 ntBASIC4.7□□□□□ -1.66
CD74P04233 RN7SKP29-201ENST00000410957 272 ntBASIC4.7□□□□□ -1.66
CD74P04233 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.7□□□□□ -1.66
CD74P04233 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD74P04233 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.7□□□□□ -1.66
CD74P04233 AC017019.1-201ENST00000426129 261 ntBASIC4.7□□□□□ -1.66
CD74P04233 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CD74P04233 RPL19P16-201ENST00000433839 588 ntBASIC4.7□□□□□ -1.66
CD74P04233 AC007679.3-201ENST00000434035 414 ntBASIC4.7□□□□□ -1.66
CD74P04233 TUBB4BP6-201ENST00000437576 479 ntBASIC4.7□□□□□ -1.66
CD74P04233 AC245291.3-201ENST00000443400 292 ntBASIC4.7□□□□□ -1.66
CD74P04233 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms