Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RPSAP41-201ENST00000439695 860 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 AC114982.2-201ENST00000461396 358 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 RN7SL222P-201ENST00000476452 299 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 RN7SL826P-201ENST00000479724 288 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 TRBV5-2-201ENST00000489095 273 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 RN7SL808P-201ENST00000496066 299 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.14□□□□□ -1.43
CHRNA1P02708 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CHRNA1P02708 GOLGA5P1-201ENST00000507317 980 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA1P02708 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC078878.1-201ENST00000539832 958 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA1P02708 MIR4311-201ENST00000580794 100 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC006115.2-201ENST00000596823 202 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA1P02708 AC005229.3-201ENST00000603438 323 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.14□□□□□ -1.43
CHRNA1P02708 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CHRNA1P02708 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHRNA1P02708 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.14□□□□□ -1.43
CHRNA1P02708 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHRNA1P02708 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.13□□□□□ -1.43
CHRNA1P02708 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CHRNA1P02708 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CHRNA1P02708 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 AL645927.1-201ENST00000396783 406 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA1P02708 REREP1Y-201ENST00000422655 198 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA1P02708 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA1P02708 AL365220.1-201ENST00000432923 399 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA1P02708 REREP2Y-201ENST00000439103 200 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 OTX2P1-201ENST00000450956 354 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 CR383656.1-201ENST00000484916 377 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AC231760.1-201ENST00000498002 260 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.13□□□□□ -1.43
CHRNA1P02708 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CHRNA1P02708 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 BLZF2P-201ENST00000553776 1130 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AC007066.2-202ENST00000566531 914 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA1P02708 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.13□□□□□ -1.43
CHRNA1P02708 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.13□□□□□ -1.43
CHRNA1P02708 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 AC022164.1-201ENST00000568767 2673 ntBASIC6.13□□□□□ -1.43
CHRNA1P02708 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CHRNA1P02708 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CHRNA1P02708 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHRNA1P02708 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CHRNA1P02708 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.13□□□□□ -1.43
CHRNA1P02708 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA1P02708 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 RNA5SP91-201ENST00000390902 119 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.12□□□□□ -1.43
CHRNA1P02708 RPL23AP27-201ENST00000415161 451 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 AL133325.1-201ENST00000421090 382 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA1P02708 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.12□□□□□ -1.43
CHRNA1P02708 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA1P02708 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CHRNA1P02708 RN7SL329P-201ENST00000467740 299 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.12□□□□□ -1.43
CHRNA1P02708 AC079080.1-201ENST00000479841 822 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 AC004453.1-201ENST00000487895 408 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 RPEP1-201ENST00000504507 658 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 AC002456.2-201ENST00000509356 380 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHRNA1P02708 RN7SKP99-201ENST00000517028 307 ntBASIC6.12□□□□□ -1.43
CHRNA1P02708 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.12□□□□□ -1.43
CHRNA1P02708 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms