Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR6839-201ENST00000620425 113 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 AC089999.3-201ENST00000622440 577 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 AP000648.2-201ENST00000624182 404 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.56□□□□□ -1.52
SHOX2O60902 AC020633.1-201ENST00000468439 2247 ntBASIC5.56□□□□□ -1.52
SHOX2O60902 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHOX2O60902 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SHOX2O60902 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHOX2O60902 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.55□□□□□ -1.52
SHOX2O60902 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SHOX2O60902 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.55□□□□□ -1.52
SHOX2O60902 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC013442.1-201ENST00000397347 228 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 NIFKP3-201ENST00000417799 865 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 LYPLA1P1-201ENST00000434514 622 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC002553.3-201ENST00000453002 341 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 RBMY2HP-201ENST00000457961 720 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 RPS7P11-201ENST00000484240 586 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.55□□□□□ -1.52
SHOX2O60902 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 HMGB3P16-201ENST00000508037 287 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 AC095052.1-201ENST00000509955 863 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 AC074255.1-201ENST00000511259 501 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC084121.1-201ENST00000533882 835 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.55□□□□□ -1.52
SHOX2O60902 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.55□□□□□ -1.52
SHOX2O60902 AC015819.1-201ENST00000613588 663 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 AC099654.11-201ENST00000638857 294 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
SHOX2O60902 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.55□□□□□ -1.52
SHOX2O60902 MTND5P12-201ENST00000502851 1449 ntBASIC5.55□□□□□ -1.52
SHOX2O60902 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SHOX2O60902 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHOX2O60902 AC012254.3-201ENST00000591183 2117 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
SHOX2O60902 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHOX2O60902 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHOX2O60902 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 AL078599.1-201ENST00000402075 293 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 NPM1P38-201ENST00000403835 865 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 RPSAP35-201ENST00000413753 818 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 OR13Z1P-201ENST00000416141 834 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.54□□□□□ -1.52
SHOX2O60902 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 DEFA9P-201ENST00000433042 285 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AL645936.1-201ENST00000441979 518 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AL590004.3-202ENST00000445883 451 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.54□□□□□ -1.52
SHOX2O60902 RPS24P16-201ENST00000497294 392 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.54□□□□□ -1.52
SHOX2O60902 SNX18P25-201ENST00000510539 758 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 GAPDHP71-201ENST00000511530 1003 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 CR383658.1-201ENST00000514609 734 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.54□□□□□ -1.52
SHOX2O60902 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.54□□□□□ -1.52
SHOX2O60902 AC096996.1-201ENST00000563813 325 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 OR1E3-201ENST00000575608 948 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 MIR3157-201ENST00000578688 85 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AC011840.5-201ENST00000582125 771 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 AC068768.2-201ENST00000602352 343 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AL021918.2-201ENST00000613415 194 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AC037198.3-201ENST00000616754 526 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AC211486.4-201ENST00000621495 113 ntBASIC5.54□□□□□ -1.52
SHOX2O60902 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.54□□□□□ -1.52
SHOX2O60902 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.54□□□□□ -1.52
SHOX2O60902 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms