Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC006499.4-201ENST00000510947 694 ntBASIC5.36□□□□□ -1.55
SSX4O60224 KHDC1P1-201ENST00000511053 508 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX4O60224 RNA5SP400-201ENST00000517155 111 ntBASIC5.36□□□□□ -1.55
SSX4O60224 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX4O60224 IGHV4-55-201ENST00000520889 368 ntBASIC5.36□□□□□ -1.55
SSX4O60224 TRIM77BP-201ENST00000524985 1119 ntBASIC5.36□□□□□ -1.55
SSX4O60224 OR8Q1P-201ENST00000526467 655 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX4O60224 AC036111.2-201ENST00000533247 901 ntBASIC5.36□□□□□ -1.55
SSX4O60224 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX4O60224 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.36□□□□□ -1.55
SSX4O60224 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX4O60224 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.36□□□□□ -1.55
SSX4O60224 AC090616.1-201ENST00000583895 447 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AC040174.2-201ENST00000602701 465 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AC073333.2-201ENST00000603589 769 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.36□□□□□ -1.55
SSX4O60224 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AL080312.2-201ENST00000613001 630 ntBASIC5.36□□□□□ -1.55
SSX4O60224 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 AC015722.2-201ENST00000622210 551 ntBASIC5.36□□□□□ -1.55
SSX4O60224 AC006453.5-201ENST00000636451 619 ntBASIC5.36□□□□□ -1.55
SSX4O60224 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.36□□□□□ -1.55
SSX4O60224 EIF3EP1-201ENST00000433978 1316 ntBASIC5.36□□□□□ -1.55
SSX4O60224 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 MTCO1P7-201ENST00000419523 1542 ntBASIC5.36□□□□□ -1.55
SSX4O60224 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX4O60224 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX4O60224 AP001284.1-201ENST00000528393 2118 ntBASIC5.36□□□□□ -1.55
SSX4O60224 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.36□□□□□ -1.55
SSX4O60224 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSX4O60224 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 AC005224.3-201ENST00000584683 2140 ntBASIC5.35□□□□□ -1.55
SSX4O60224 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 AC011503.2-201ENST00000594230 1500 ntBASIC5.35□□□□□ -1.55
SSX4O60224 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 DDX6P1-205ENST00000441966 1436 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX4O60224 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX4O60224 OR13C3-201ENST00000374781 1108 ntBASIC5.35□□□□□ -1.55
SSX4O60224 UBE2V1P15-201ENST00000407776 448 ntBASIC5.35□□□□□ -1.55
SSX4O60224 RNU2-72P-201ENST00000411175 163 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 AC066692.1-201ENST00000421721 457 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX4O60224 AL390879.2-203ENST00000426943 1121 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX4O60224 AL590004.3-202ENST00000445883 451 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC097463.1-201ENST00000447288 481 ntBASIC5.35□□□□□ -1.55
SSX4O60224 CCRL1P1-201ENST00000449542 1053 ntBASIC5.35□□□□□ -1.55
SSX4O60224 PPIAP7-201ENST00000454070 489 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC084754.1-201ENST00000463466 464 ntBASIC5.35□□□□□ -1.55
SSX4O60224 RPL7P51-201ENST00000490532 749 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX4O60224 AC011411.1-201ENST00000509592 876 ntBASIC5.35□□□□□ -1.55
SSX4O60224 CYP4F27P-201ENST00000514557 494 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC067904.2-201ENST00000517322 1283 ntBASIC5.35□□□□□ -1.55
SSX4O60224 IGKV3D-34-201ENST00000522638 302 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AP000620.1-201ENST00000527147 504 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX4O60224 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX4O60224 AL049779.3-201ENST00000557141 606 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC092332.1-201ENST00000563684 829 ntBASIC5.35□□□□□ -1.55
SSX4O60224 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX4O60224 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX4O60224 AC060780.2-201ENST00000589047 198 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX4O60224 AC005332.4-201ENST00000592752 579 ntBASIC5.35□□□□□ -1.55
SSX4O60224 MIMT1-201ENST00000597105 1050 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC108865.2-201ENST00000606881 432 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AL159169.2-201ENST00000610061 1269 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC004801.6-201ENST00000616571 978 ntBASIC5.35□□□□□ -1.55
SSX4O60224 RFPL4AP6-201ENST00000616792 846 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AC129778.1-202ENST00000623812 261 ntBASIC5.35□□□□□ -1.55
SSX4O60224 AP000720.1-201ENST00000625091 483 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms