Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SRRM4A7MD48 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SRRM4A7MD48 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SRRM4A7MD48 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SRRM4A7MD48 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.7□□□□□ -1.66
SRRM4A7MD48 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.7□□□□□ -1.66
SRRM4A7MD48 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL121950.1-201ENST00000624993 2077 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 CASC19-260ENST00000641828 2001 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 RNA5SP232-201ENST00000364144 119 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 RNA5SP91-201ENST00000390902 119 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 HMGB3P7-201ENST00000400214 611 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 MIR1275-201ENST00000408770 80 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 ATP5LP2-201ENST00000440646 311 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 RPL6P30-201ENST00000443382 862 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 REG1CP-206ENST00000447469 496 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC069277.2-201ENST00000454211 432 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC108751.3-201ENST00000461814 1020 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC012123.2-201ENST00000485809 248 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 OR9N1P-202ENST00000494289 481 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC109635.6-201ENST00000525487 1113 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 SNX6P1-201ENST00000601728 1224 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC040174.2-201ENST00000602701 465 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL096803.3-201ENST00000609032 532 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC108673.3-201ENST00000609183 335 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC004241.3-201ENST00000611728 517 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 CFTRP2-201ENST00000634304 199 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AL163152.1-201ENST00000642001 374 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC239868.2-201ENST00000564237 4527 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC093225.1-201ENST00000506867 1408 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SRRM4A7MD48 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SRRM4A7MD48 AC104966.1-201ENST00000467010 1464 ntBASIC4.69□□□□□ -1.66
SRRM4A7MD48 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SRRM4A7MD48 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 SNORD115-48-201ENST00000364764 76 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 DPPA2P2-201ENST00000418220 897 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 RPL5P2-201ENST00000429598 854 ntBASIC4.68□□□□□ -1.66
SRRM4A7MD48 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.68□□□□□ -1.66
SRRM4A7MD48 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms