Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 PSG10P-201ENST00000501199 1500 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 KARSP3-201ENST00000571212 1504 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 RNU6-481P-201ENST00000384194 107 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 ELOCP17-201ENST00000414751 326 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 NPM1P26-201ENST00000426339 738 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 NDUFA12P1-201ENST00000455914 406 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 RN7SL193P-201ENST00000491708 276 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC015864.1-201ENST00000496512 544 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 RPL7L1P4-201ENST00000513004 707 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC092121.1-201ENST00000569452 202 ntBASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LOC102724428A0A0B4J2F2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 NEK2P4-201ENST00000425793 1329 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL512310.3-201ENST00000547023 1335 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC119674.1-204ENST00000641348 1343 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 Y_RNA.559-201ENST00000384686 107 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 U3.25-201ENST00000391209 220 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL603865.2-201ENST00000401679 213 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 GTF2IP3-201ENST00000433887 494 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 GAPDHP48-201ENST00000436626 961 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 DNAJA1P6-201ENST00000437347 354 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 MTATP6P13-201ENST00000438531 667 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 RPL6P5-201ENST00000445678 828 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 VN1R32P-201ENST00000452234 905 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 RPL6P9-201ENST00000466502 859 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 RPS26P39-201ENST00000469206 341 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 RN7SL705P-201ENST00000481678 294 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 IGHV3-57-201ENST00000520143 280 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC005000.1-201ENST00000536192 288 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL354943.1-201ENST00000572103 781 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AP005119.1-201ENST00000580956 292 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AP000811.1-201ENST00000603803 651 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL513218.1-201ENST00000606527 391 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AL591167.1-201ENST00000607321 456 ntBASIC8.09□□□□□ -1.11
LOC102724428A0A0B4J2F2 AC080013.4-201ENST00000607624 649 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms