Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 NXF4-202ENST00000416098 1465 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC104966.1-201ENST00000467010 1464 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC018717.1-201ENST00000457712 1505 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 FBXL21-201ENST00000297158 1305 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AL133243.2-201ENST00000610331 1621 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 CASC19-284ENST00000642142 1868 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC092692.1-201ENST00000623625 2595 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 MIR142-201ENST00000384835 87 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ATF1P1-201ENST00000406040 927 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 UBE2V1P9-201ENST00000414760 368 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC022022.1-201ENST00000430304 178 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 CYCSP11-201ENST00000436426 315 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 HIGD1AP16-201ENST00000450986 258 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 OR7E99P-201ENST00000505750 922 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 RPA2P3-201ENST00000533268 770 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AP003717.3-201ENST00000544832 1180 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC090888.3-201ENST00000558917 509 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC013437.2-201ENST00000639587 677 ntBASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A3BPQ9Y5P4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC027575.3-201ENST00000583058 2747 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC068870.3-201ENST00000625077 2536 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 SHQ1P1-201ENST00000437111 1544 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RNA5SP433-201ENST00000364491 114 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC234772.1-201ENST00000377927 937 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RNU6-1005P-201ENST00000384519 107 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RPL22P22-201ENST00000395439 379 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RPS27AP11-201ENST00000402798 447 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RNA5SP251-201ENST00000410614 137 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RN7SKP144-201ENST00000411108 279 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC010385.1-201ENST00000412374 256 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 HMGA1P8-201ENST00000414130 321 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC069154.1-201ENST00000432914 542 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 RPS27AP3-201ENST00000453803 454 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AOX3P-204ENST00000491025 2107 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 MTND6P8-201ENST00000503471 522 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AP003066.2-201ENST00000529375 555 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AL049830.4-201ENST00000555149 351 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AC027229.1-201ENST00000583887 253 ntBASIC6.93□□□□□ -1.3
COL4A3BPQ9Y5P4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms