Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 AP002505.2-201ENST00000623585 696 ntBASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 AL591543.1-202ENST00000642095 4149 ntBASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 ICE2P1-201ENST00000512800 1849 ntBASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PCDHGA11Q9Y5H2 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 FAM32BP-201ENST00000344033 333 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RNA5SP389-201ENST00000362610 115 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RNA5SP226-201ENST00000362653 115 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RNU6-462P-201ENST00000362659 105 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 Y_RNA.160-201ENST00000363677 92 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RNA5SP161-201ENST00000363871 115 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RNA5SP149-201ENST00000364952 92 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 OR52E6-202ENST00000379946 954 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL23AP29-201ENST00000397284 453 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 CBX1P3-201ENST00000413296 527 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC011753.4-201ENST00000417974 311 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 C1DP2-201ENST00000418167 426 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AL022100.1-202ENST00000421214 548 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AL356583.2-201ENST00000426536 280 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 HMGN2P24-201ENST00000433516 273 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC099344.1-201ENST00000433548 492 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL37P21-201ENST00000435890 276 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AL139156.3-201ENST00000454802 394 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC112206.1-201ENST00000468416 477 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RPL5P15-201ENST00000475870 897 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC074386.1-201ENST00000476560 767 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC087385.2-201ENST00000477729 498 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AF131216.2-201ENST00000512316 564 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 MTCO1P35-201ENST00000515270 228 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 SCARNA15.1-201ENST00000516384 125 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC138915.2-201ENST00000569776 97 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 SNORD39.2-201ENST00000579995 76 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC018737.1-201ENST00000603900 204 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC007262.1-201ENST00000604099 321 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AP003400.3-201ENST00000624904 346 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 AL445250.1-203ENST00000641829 1535 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 UGT2B25P-201ENST00000511504 1586 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 BX284613.1-201ENST00000452221 1641 ntBASIC7.4□□□□□ -1.22
PCDHGA11Q9Y5H2 CCT8P1-201ENST00000413611 1657 ntBASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 BX322650.1-201ENST00000332359 2143 ntBASIC7.4□□□□□ -1.23
PCDHGA11Q9Y5H2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms