Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RBPJP7-201ENST00000442803 1447 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RBPJP5-201ENST00000449433 1447 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AL662795.2-201ENST00000624252 3706 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 OR52B3P-201ENST00000314715 928 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 TMSB4XP4-201ENST00000323496 618 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 MIR323A-201ENST00000362199 86 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RN7SKP69-201ENST00000365390 305 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RN7SKP81-201ENST00000365603 331 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RNU6-1000P-201ENST00000391066 106 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 SNORA17A-201ENST00000391185 133 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RNA5SP178-201ENST00000410380 128 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RN7SKP161-201ENST00000411110 305 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AL035660.1-201ENST00000422041 222 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AL451136.1-201ENST00000435399 325 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AL355355.1-201ENST00000442900 793 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC016027.4-201ENST00000450866 277 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RPL31P53-201ENST00000457065 348 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC073594.1-201ENST00000462065 364 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RN7SL193P-201ENST00000491708 276 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC011411.1-201ENST00000509592 876 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC130364.2-201ENST00000528639 604 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC139103.1-201ENST00000534696 1030 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AL163051.2-201ENST00000618976 735 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC127024.6-201ENST00000621598 424 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 SNORA17.5-201ENST00000630429 132 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 RNF19BPY-201ENST00000458209 1550 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AP001284.1-201ENST00000528393 2118 ntBASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTDP1Q9Y5B0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 WDR95P-201ENST00000425638 1542 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC083843.2-201ENST00000568248 6253 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 RNU4-40P-201ENST00000364351 143 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 PCNPP4-201ENST00000414817 517 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 MTND4LP21-201ENST00000415303 295 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC106883.1-201ENST00000418805 562 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AL121882.1-201ENST00000422893 417 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC017019.1-201ENST00000426129 261 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 NDUFS5P5-201ENST00000437256 321 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC004854.1-201ENST00000440356 349 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AL606490.8-201ENST00000441624 319 ntBASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CTDP1Q9Y5B0 AP006222.1-205ENST00000450734 457 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms