Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 AC011493.1-201ENST00000596753 1632 ntBASIC8.17□□□□□ -1.1
SHANK2Q9UPX8 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 SNRPCP2-201ENST00000504370 475 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AC013701.1-201ENST00000522657 465 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AC122688.1-201ENST00000541494 223 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 BNIP3P1-201ENST00000547295 580 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 CASC19-243ENST00000641588 1546 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 ZNF812P-201ENST00000457674 1694 ntBASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SHANK2Q9UPX8 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 SNORD56.6-201ENST00000384569 71 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AC104837.2-201ENST00000427236 424 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 RBMY2QP-201ENST00000429799 1147 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AL451063.1-201ENST00000450164 1133 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AC092905.1-201ENST00000467527 949 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AC090114.3-201ENST00000479267 829 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 AL353729.2-201ENST00000605859 1249 ntBASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.15□□□□□ -1.1
SHANK2Q9UPX8 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SHANK2Q9UPX8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.15□□□□□ -1.11
SHANK2Q9UPX8 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 AL117378.2-201ENST00000622916 1337 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 RN7SKP104-201ENST00000362605 328 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 RAB9BP1-201ENST00000519581 626 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 OR5AZ1P-201ENST00000527448 943 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 AC060780.2-201ENST00000589047 198 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 AC234771.5-201ENST00000600161 514 ntBASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.14□□□□□ -1.11
SHANK2Q9UPX8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC093655.2-201ENST00000425735 631 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 C4BPAP2-201ENST00000428434 478 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC011753.3-201ENST00000443436 406 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 SCARNA16.4-201ENST00000516956 187 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 OR11H3P-201ENST00000554547 982 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC005341.1-201ENST00000571086 708 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 MIR3934-201ENST00000579806 107 ntBASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC8.13□□□□□ -1.11
SHANK2Q9UPX8 AC087283.1-201ENST00000604029 1074 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms