Protein–RNA interactions for Protein: Q9UPQ9

TNRC6B, Trinucleotide repeat-containing gene 6B protein, humanhuman

Known RBP Predictions only

Length 1,833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6BQ9UPQ9 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
TNRC6BQ9UPQ9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
TNRC6BQ9UPQ9 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNRC6BQ9UPQ9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 VN1R21P-201ENST00000426703 765 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 OSTCP1-201ENST00000455507 450 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 RN7SKP147-201ENST00000517154 244 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AF230666.2-201ENST00000602328 725 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AP000769.2-201ENST00000602344 396 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AP004607.3-201ENST00000530354 3915 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 RNA5SP505-201ENST00000364748 108 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AL133482.1-201ENST00000415988 498 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 DDX39BP1-205ENST00000422507 192 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AL451063.1-201ENST00000450164 1133 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 RPS3AP53-201ENST00000454716 778 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 RPL7P16-201ENST00000479738 738 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AC008745.1-201ENST00000604064 271 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 AC093799.2-201ENST00000610062 578 ntBASIC5.34□□□□□ -1.55
TNRC6BQ9UPQ9 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
TNRC6BQ9UPQ9 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
TNRC6BQ9UPQ9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 INTS6P1-201ENST00000504674 2530 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 OR9K1P-202ENST00000641111 3217 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC009831.5-201ENST00000624000 3189 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 CASC19-221ENST00000641309 1382 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC107980.1-201ENST00000558671 3355 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 ZNF840P-201ENST00000504759 1996 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 SNORD8-201ENST00000363915 110 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC096741.1-201ENST00000472250 846 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC021106.1-201ENST00000509020 1058 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 TOMM22P4-201ENST00000511318 336 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AL671862.1-201ENST00000515851 349 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC079075.1-201ENST00000559543 878 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC012557.1-201ENST00000607115 611 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC083899.1-201ENST00000454465 3819 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC092747.4-201ENST00000620519 1861 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 AC010329.1-201ENST00000593903 8328 ntBASIC5.33□□□□□ -1.56
TNRC6BQ9UPQ9 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNRC6BQ9UPQ9 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNRC6BQ9UPQ9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TNRC6BQ9UPQ9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNRC6BQ9UPQ9 RN7SKP149-201ENST00000363008 344 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms