Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SCN11AQ9UI33 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 CASC19-243ENST00000641588 1546 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 EIF2S2P3-201ENST00000428356 999 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 TRY2P-201ENST00000448860 689 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 AC104634.1-201ENST00000452720 462 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 RPS3AP41-201ENST00000462701 778 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 AC097484.1-201ENST00000471148 389 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 MIR105-1-201ENST00000385222 81 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 AC087360.1-201ENST00000518788 616 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 OR4A43P-201ENST00000532938 908 ntBASIC6.95□□□□□ -1.3
SCN11AQ9UI33 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SCN11AQ9UI33 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 ZNF733P-202ENST00000444809 1573 ntBASIC6.94□□□□□ -1.3
SCN11AQ9UI33 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 GSTA7P-201ENST00000438425 448 ntBASIC6.94□□□□□ -1.3
SCN11AQ9UI33 OR51A1P-201ENST00000511110 946 ntBASIC6.94□□□□□ -1.3
SCN11AQ9UI33 SCARNA20.4-201ENST00000516969 131 ntBASIC6.94□□□□□ -1.3
SCN11AQ9UI33 YWHABP2-201ENST00000540201 713 ntBASIC6.94□□□□□ -1.3
SCN11AQ9UI33 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 AC074101.1-201ENST00000637861 241 ntBASIC6.94□□□□□ -1.3
SCN11AQ9UI33 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.94□□□□□ -1.3
SCN11AQ9UI33 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 AC079753.1-201ENST00000623243 3868 ntBASIC6.93□□□□□ -1.3
SCN11AQ9UI33 SNORA70.9-201ENST00000384370 135 ntBASIC6.93□□□□□ -1.3
SCN11AQ9UI33 Z92846.1-201ENST00000456203 268 ntBASIC6.93□□□□□ -1.3
SCN11AQ9UI33 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 AC100827.5-201ENST00000615883 426 ntBASIC6.93□□□□□ -1.3
SCN11AQ9UI33 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 AC002090.1-201ENST00000625000 2138 ntBASIC6.93□□□□□ -1.3
SCN11AQ9UI33 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SCN11AQ9UI33 GNG5P2-201ENST00000372054 207 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.92□□□□□ -1.3
SCN11AQ9UI33 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.92□□□□□ -1.3
SCN11AQ9UI33 RPL34P20-201ENST00000442771 351 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms