Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL121977.1-201ENST00000401636 979 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 USP24P1-201ENST00000433802 779 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 RN7SL177P-201ENST00000476596 299 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 USP9YP2-201ENST00000504503 1000 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 USP9YP1-201ENST00000513521 1002 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AGGF1P7-201ENST00000562369 913 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AL513327.3-201ENST00000602618 469 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AL137246.1-201ENST00000607072 977 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AC009950.2-201ENST00000636548 183 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AC020656.2-201ENST00000613291 5309 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 AL049634.1-201ENST00000453770 1720 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 CASC19-248ENST00000641674 1356 ntBASIC5.03□□□□□ -1.6
CLCF1Q9UBD9 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AL592429.1-201ENST00000403909 1473 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 RN7SKP162-201ENST00000363605 345 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 Z68694.1-201ENST00000413929 841 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 NPM1P4-201ENST00000414095 812 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 MARK2P12-201ENST00000420129 585 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC019185.1-201ENST00000442718 389 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 SPRYD7P1-201ENST00000443861 570 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 RPL35AP19-201ENST00000469425 329 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 SIAH1P1-201ENST00000479411 923 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 RN7SL214P-201ENST00000487317 265 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 IGLV3-24-201ENST00000517477 197 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC139697.1-201ENST00000548429 745 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 MIR4311-201ENST00000580794 100 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC012616.1-201ENST00000600294 197 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AL133481.2-203ENST00000607558 139 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AC007204.2-201ENST00000615022 616 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 MIR8080-201ENST00000622224 89 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 RARSP1-201ENST00000542842 1418 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 AL137141.1-201ENST00000624622 4836 ntBASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLCF1Q9UBD9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 PWAR1-201ENST00000624188 2414 ntBASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.01□□□□□ -1.61
CLCF1Q9UBD9 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms